Source: COLORADO STATE UNIVERSITY submitted to NRP
DEVELOPMENT OF INTEGRATED PEST MANAGEMENT AGAINST AN EMERGING STEM-BORING PEST OF QUINOA, AMAUROMYZA KARLI (DIPTERA: AGROMYZIDAE)
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
ACTIVE
Funding Source
Reporting Frequency
Annual
Accession No.
1030194
Grant No.
2023-68008-39850
Cumulative Award Amt.
$300,000.00
Proposal No.
2022-10040
Multistate No.
(N/A)
Project Start Date
May 1, 2023
Project End Date
Apr 30, 2026
Grant Year
2023
Program Code
[A1701]- Critical Agricultural Research and Extension: CARE
Recipient Organization
COLORADO STATE UNIVERSITY
(N/A)
FORT COLLINS,CO 80523
Performing Department
(N/A)
Non Technical Summary
Climate change and its impact on agricultural crops is driving the expansion of cropping systems to plants better adapted to rising temperatures, prolonged periods of drought, poor soils, and high salinity. One of such crops is quinoa,Chenopodium quinoaWilld (Amaranthaceae) - a traditionally Andean grain cultivated in South America for over 5,000 years.Quinoa is a climate-resilient crop that can yield adequately with mere 10-15 inches of irrigation.Its production is relatively new to the U.S., and it was introduced to San Luis Valley in southern Colorado several decades ago. Over 3,000 acres of quinoa are raised in Colorado by small-acreage farmers, and quinoa production has expanded to other regions such as Idahoand Pacific Northwest.However, a stem-boring insect has recently colonized quinoa in Colorado (and neighboring states) - an agromyzid fly,Amauromyza karliHendel (Diptera: Agromyzidae). These infestations were discovered in 2021 in 100% of quinoa fields in San Luis Valley, CO, and have either caused severe yield losses or destroyed the crop entirely.This emerging and invasive pest of quinoa is posing an immediate threat to production of this niche crop in Colorado and other states (e.g., Idaho and Oregon), and requires immediate action to develop effective strategies to suppress its devastating impact on quinoa in the U.S. The critical knowledge gaps we need to address to effectively suppress this highly destructive pest include 1) establishing abundance patterns ofA. karliin the field that can inform planting date modifications and timing of biological and chemical control, 2)knowledge of weeds that can serve as hosts to the fly to formulate recommendations for weed management that can effectively lower the risk and severity of infestations in quinoa;3) evaluating integrated pest management tactics such as host plant resistance within existing quinoa varieties, biological control, and systemic insecticides; and 4) ensuring that the recommendations for management are widely shared with quinoa producers.The long-term goal is to support profitable quinoa farming while protecting the environment and facilitate increased production of this climate-resilient crop well-adapted to our increasingly hotter and drier weather patterns.
Animal Health Component
100%
Research Effort Categories
Basic
(N/A)
Applied
100%
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
2111599113070%
2154020116030%
Goals / Objectives
A stem-boring fly, Amauromyza karli Hendel (Diptera: Agromyzidae) was recently discovered in quinoa and its devastating outbreaks destroyed all quinoa grown in Colorado in 2022. This pest threatens sustainability of this crop and the future of quinoa farming in the U.S. We designed an integrated project that includes research and Extension to ensure rapid adoption of effective management recommendations against this emerging pest. The short-term goal of this project is to aid quinoa producers in managing A. karli using integrated approaches, and to cooperate with stakeholders to facilitate dissemination of research-supported management recommendations that are effective, feasible for growers, sustainable, and ecologically sound. The long-term goal is to support profitable quinoa farming while protecting the environment and facilitate increased production of this climate-resilient crop well-adapted to our increasingly hotter and drier weather patterns. These goals will be accomplished through the following objectives:Objective 1: Determine life history traits ofA. karlirelevant to its managementEstablish peak activity of the flies in the field to inform management tactics such as planting date modifications and timing of biological and chemical controlIdentify non-crop hosts ofA. karliin the field to inform weed management strategies focused on eliminating alternative hosts in vicinity of quinoaObjective 2: Evaluate integrated pest management tactics to suppressA. karliin quinoaExplore host plant resistance againstA. karliamong existing quinoa varietiesTest the effectiveness of endophytic fungi as effective biocontrol forA. karliQuantify the impact of systemic insecticides on suppressingA. karlipopulations in the fieldObjective 3: Develop outreach and education programming to increase awareness ofA. karliand its management strategies among quinoa growers, industry agronomists, crop consultants, diagnostic labs, researchers, and other stakeholders.
Project Methods
Objective 1:Determine life history traits ofA. karlirelevant to its management:Field surveys:Field surveys will be conducted in fields owned by quinoa producers in San Louis Valley, CO. At least four different fields will be used in these surveys, which will be repeated over two growing seasons.Area within and outside (~100-foot perimeter) of the cooperators' fields will be surveyed, and the activities will be repeated in year one and year two of the project. Objective 2:Evaluate integrated pest management tactics to suppressA. karliin quinoaa.Explore host plant resistance against A. karli among existing quinoa varieties:Field experiment:Quinoa varieties (30) previously identified to possess any level of resistance or tolerance toA. karliwill be planted using standard agronomic practices in a small plot trial at a cooperator's farm. Each variety will be replicated at least four times (N=120). These surveys of quinoa varieties for resistance or tolerance toA. karliwill be conducted in year one and two of the project.Test the effectiveness of fungi as effective biocontrol for A. karli:Entomopathogenic fungi:Two strategies will be used to identify fungal species/strains to be tested for pathogenicity againstA. karlilarvae and adults. First, using field-collected larvae we will test for presence of naturally-occuring fungi and isolate them from the insects. Second, we will testin-vitro and in-planta pathogenicity toA. karliand endophytic abilities.Those fungal species that show efficacy (i.e., kill the larvae) will then be testedin planta. Efficacious fungi will be tested in quinoa fields to confirm their biological control potential.Quantify the impact of systemic insecticides on suppressing A. karli populations in the field:This objective will be carried out at the Colorado State University San Louis Valley Research Center in Center, CO. Two insecticides with systemic activity will be tested, imidacloprid, and spirotetramat.Each of these treatments will be replicated six times for each insecticide. Individual plots(replicates) will measure 4 rows by 20 feet with 2-row buffers between plots, and the entire experiment will be embedded within a 4-acre field of quinoa. The experiment will be repeated in both years of the project.Objective 3: Develop outreach and education programming to increase awareness ofA. karliand its management strategies among quinoa growers, industry agronomists, crop consultants, diagnostic labs, researchers, and other stakeholdersa.Advisory Board establishment and role in research design, dissemination, and assessment of outcomes:Advisory Board comprised of the leaders of Colorado Quinoa LLC, Arden Mills, and quinoa producers will be formed. Members of the Board have already provided input and comments on the design of this research and participated actively in formulating priorities for this project. The Advisory Board will meet quarterly for the duration of this project to receive updates regarding progress of the work and continue providing feedback on research design. Members of the Board will also assess the outcomes of the work and evaluate feasibility of implementing recommendations supported by research outcomes.Creation of comprehensive web resources:Accessible resources outlining the scope of the problem, results of this research, and comprehensive recommendations will be created and housed on the CSU IPM website (https://agsci.colostate.edu/agbio/ipm/). The website will also incorporate means for users to leave feedback, participate in surveys, and ask questions. In addition, project updates will be posted on separate social media and platforms such as Twitter and Facebook and the Agricultural Biology departmental website (https://agbio.agsci.colostate.edu/).Grower meetings and facilitation of peer-to-peer education:To facilitate implementation of IPM recommendations forA. karliwe will organize on-farm field days and grower meetings on farms where the research will be conducted. We will include growers in the outreach activities as well, and we will facilitate peer-to-peer education and involve producers in field demonstrations to further increase adoption of research-supported recommendations for management ofA. karli.Dissemination of the work through talks, presentations at regional and national meetings, factsheets, and peer-reviewed publications:Researchers will present project findings at professional meetings such as Entomological Society of America (ESA) Pacific and North Central branch meetings and annual meetings. The work will also be shared through a formal factsheet on the impact and management ofA. kaliin quinoa, and peer-reviewed publications.Evaluation of Extension and Education Activities:The effectiveness of resources posted within the IPM website and social media postings will be evaluated by several verifiable indicators, including number of visitors to the website, number of downloads, comments, and suggestions posted by visitors, personal emails, and phone call from stakeholders about the information provided. In addition, evaluations and surveys will be distributed at each of the meetings and outcomes will be summarized each year and distributed on the website. Moreover, the impact of publications including scientific and extension publications will be evaluated based on number of views, downloads and citations, and number of requests for publications by non-participating growers. Lastly, the strongest measure of our success in dissemination of research outcomes and implementation of our recommendations will be reflected in return to quinoa acreage prior to outbreaks ofA. karliin 2021. This will be used as an indicator of the effectiveness of our extension and education activities.

Progress 05/01/24 to 04/30/25

Outputs
Target Audience:Target audience of this work includes primarily quinoa producers, who were the first to identify this problem and spearheaded efforts to conduct research focused on management of this pest. Most of the field research has been conducted in collaboration with the producers and on-farm. Target audience also includes scientists in fields of applied and basic entomology, plant pathology, fungal biology, biological control, and biology; Extension faculty and staff, and general public. Changes/Problems:Low densities of the fly have been the major challenge in this project. Owing to the fact that it is not possible to establish the fly in greenhouse colonies, as is the case with most stem-boring insects, we rely on the field populations to address our research questions. We believe the third season of data will allow us to address some of the issues and collect enough data to support our conclusions. What opportunities for training and professional development has the project provided?The graduate studentinvolved in the project presented data at multiple conferences and gained key skills in plant and insect identification, data collection and data summaries, statistical analyses, and writing for lay and technical audiences. The studentalso gained skills relevant to interacting with and communicating with the stakeholders through commodity-focused talks and informal interactions. How have the results been disseminated to communities of interest?Results have been shared with the Advisory Board, and via the website established to disseminate resources to stakeholders (e.g.,https://agsci.colostate.edu/agbio/ipm-pests/amauromyza-karli-in-quinoa/). A publication summarizing our knowledge regarding the use of endophytic entomopathogenic fungi was published in 2024. What do you plan to do during the next reporting period to accomplish the goals? In 2025 we will focus on completing field experiments: one more season of testing resistant varieties of quinoa, and exploring whether addition of commonly used fertilizers can enhance quinoa resilience and reduce the impact of the fly. We will also complete characterizing the fungal community associated with quinoa fields to determine whether any other naturally occurring fungi can be incorporated into biological control. We will also test the efficacy of quinoa seed inoculated with entomopathogenic fungi against the larvae boring in the stems. The efforts to consolidate educational and extension resources for producers will also be undertaken this year.

Impacts
What was accomplished under these goals? Objective 1: Determine life history traits ofA. karlirelevant to its management ·Establish peak activity of the flies in the field to inform management tactics such as planting date modifications and timing of biological and chemical control.Accomplishments in 2024-2025: We have collected and analyzed data related to fly densities throughout the growing season. The second year of data collection was in 2024. Phenology models that predict adult activity have been completed and the data were recently submitted for publication. ·Identify non-crop hosts ofA. karliin the field to inform weed management strategies focused on eliminating alternative hosts in vicinity of quinoa.Accomplishments in 2024-2025: We have confirmed that relatives of quinoa such as lambsquarter as well as other weeds such as wild sunflowers can serve as hosts. We have collected seed to grow out in the greenhouse and measure bio-physical properties that can aid in selecting traits important to improving host plant resistance. Objective 2: Evaluate integrated pest management tactics to suppressA. karliin quinoa ·Explore host plant resistance againstA. karliamong existing quinoa varieties.Accomplishments in 2024-2025: We completed the second year of data collection using 10 different commercial and university lines of quinoa. Owing to low fly pressure the outcomes are inconclusive and experiments will be repeated in 2025. ·Test the effectiveness of endophytic fungi as effective biocontrol forA. karli.Accomplishments in 2024-2025:We have optimized methodology to inoculate quinoa seeds with a fungal strain with entomopathogenic activity. We confirmed the fungi remain in quinoa stems for at least 4 weeks and at about 60-80% of the plants successfully inoculated. We will test the effectiveness of this against the fly larvae in the field in 2025. ·Quantify the impact of systemic insecticides on suppressingA. karlipopulations in the field.Accomplishments in 2024: We ran a small experiment to test whether a combination of common fertilizers can enhance quinoa growth and deter the fly. The experiments were successful and lowered larval densities and injury to quinoa. Owing to lack of chemical efficacy, we will test these fertilizers on a larger, replicated scale. Objective 3: Develop outreach and education programming to increase awareness ofA. karliand its management strategies among quinoa growers, industry agronomists, crop consultants, diagnostic labs, researchers, and other stakeholders.Accomplishments in 2024-2025: We have held regular meetings of the Advisory Board and presented a factsheet describing the pest and its impact on quinoa (https://agsci.colostate.edu/agbio/ipm-pests/amauromyza-karli-in-quinoa/).

Publications

  • Type: Peer Reviewed Journal Articles Status: Published Year Published: 2024 Citation: Panwar, N., and A. Szczepaniec. 2024. Endophytic entomopathogenic fungi as biological control agents of insect pests. Pest Management Science, https://doi.org/10.1002/ps.8322.
  • Type: Other Journal Articles Status: Submitted Year Published: 2025 Citation: Panwar*, N., and A. Szczepaniec. Submitted. Seasonal phenology of Amauromyza karli Hendel (Diptera: Agromyzidae) in quinoa. Environmental Entomology.
  • Type: Conference Papers and Presentations Status: Other Year Published: 2024 Citation: Szczepaniec, A., N. Panwar, P. Olson, K. Murphy, and J. Davidson. 2024. Challenges of developing IPM for a new pest in a niche crop: Stem-boring agromyzid in quinoa. International Congress of Entomology, Kyoto, Japan.
  • Type: Conference Papers and Presentations Status: Other Year Published: 2024 Citation: Panwar, N. and A. Szczepaniec. 2024. Arthropod assemblage and seasonal phenology of Amauromyza karli Hendel (Diptera: Agromyzidae) in quinoa. 2024. Entomological Society of America Meeting, Phoenix, Arizona.
  • Type: Conference Papers and Presentations Status: Other Year Published: 2024 Citation: Panwar, N., K. Murphy, J.I. Caballero, J. Stewart, J. Davidson and A. Szczepaniec. 2024. Managing a stem borer in quinoa: Challenges of developing IPM for a new pest in a niche crop. Pest Management in the Intermountain West. Fort Collins, CO.
  • Type: Conference Papers and Presentations Status: Other Year Published: 2025 Citation: Panwar, N. and Szczepaniec, A. 2025. Phenology models to inform pest management for a new stem-boring fly in quinoa. International Pest Management Symposium, San Diego, CA.


Progress 05/01/23 to 04/30/24

Outputs
Target Audience:Target audience of this work includes quinoa producers, who were the first to identify this problem and spearheaded efforts to conduct research focused on management of this pest. Target audience also includes scientists in fields of applied and basic entomology, plant pathology, and biology; Extension faculty and staff'and general public. Changes/Problems:The major challenge in 2023 included much lower fly densities. This could have been related to the decrease in quinoa acreage. Another potential factor is higher than usual rainfall that may have contributed to improved plant health and lower fly abundance. Another year of data collection may be needed to obtain sufficient data to formulate recommendations to suppress the pest. What opportunities for training and professional development has the project provided?The graduate students involved in the project have presented data at multiple conferences and have gained key skills in plant and insect identification, data collection and data summaries, statistical analyses, and writing for lay and technical audiences. They have also gained skills relevant to interacting with and communicating with the stakeholders. How have the results been disseminated to communities of interest?Results have been shared with the Advisory Board, and via the website established to disseminate resources to stakeholders (e.g.,https://agsci.colostate.edu/agbio/ipm-pests/amauromyza-karli-in-quinoa/). A publication describing cultivation of quinoa is under preparation. Further, a publication summarizing our knowledge regarding the use of endophytic entomopathogenic fungi is under preparation as well. What do you plan to do during the next reporting period to accomplish the goals?The plans for 2024 include continual monitoring of fly densities throughout the seasonand repeating a modified protocol for testing chemical control measures to suppress the pest. The host plant resistance screening will also be continued. We also plan to implement biocontrol measures by planting quinoa inoculated with commonly used endophytic fungi on the research farm and determine the effectiveness of this approach. A video summarizing this pest and potential approaches to management is planned for the fall, as are continual meetings of the Advisory Board.

Impacts
What was accomplished under these goals? Objective 1: Determine life history traits ofA. karlirelevant to its management Establish peak activity of the flies in the field to inform management tactics such as planting date modifications and timing of biological and chemical control. Accomplishments in 2023: We have collected and analyzed data related to fly densities throughout the growing season. The second year of data collection will be conducted in 2024. Fly densities were lower than in previous years, owing to a decrease in acreage of quinoa. Identify non-crop hosts ofA. karliin the field to inform weed management strategies focused on eliminating alternative hosts in vicinity of quinoa.Accomplishments in 2023: We have collected extensive data on non-quinoa hosts of the pest and identified several genera that can serve as hosts of the fly. These include close relatives of quinoa such as lambsquarter as well as other weeds such as wild sunflowers. This will be important for weed management as well as exploring novel sources ofhost plant resistance. Objective 2: Evaluate integrated pest management tactics to suppressA. karliin quinoa Explore host plant resistance againstA. karliamong existing quinoa varieties.Accomplishments in 2023: We completed the first year of data collection using 10 different commercial and university lines of quinoa. Owing to low fly pressure the outcomes are inconclusive and experiments will be repeated in 2024. Test the effectiveness of endophytic fungi as effective biocontrol forA. karli.Accomplishments in 2023:We have established at least one fungal strain that can establish as an edophyte and has entomopathogenic activity was present in the field in San Luis Valley. We are in the process of testing several commercially available strains of other entomopathogens that can be used as endophytes in the lab and greenhouse. Quantify the impact of systemic insecticides on suppressingA. karlipopulations in the field.Accomplishments in 2023: We completed the first year of the experimentsand found that the insecticides had no effect on lowering larval survival in the stems. A second group of insecticides will be tested in 2024. Objective 3: Develop outreach and education programming to increase awareness ofA. karliand its management strategies among quinoa growers, industry agronomists, crop consultants, diagnostic labs, researchers, and other stakeholders.Accomplishments in 2023: We have created a factsheet describing the pest and its impact on quinoa (https://agsci.colostate.edu/agbio/ipm-pests/amauromyza-karli-in-quinoa/). A second factsheet describing cultivation of quinoa in Colorado is currently under review.

Publications

  • Type: Websites Status: Published Year Published: 2023 Citation: Szczepaniec, A., and G. Alnajjar. 2023. Amauromyza karli in quinoa. https://agsci.colostate.edu/agbio/ipm-pests/amauromyza-karli-in-quinoa/
  • Type: Conference Papers and Presentations Status: Other Year Published: 2023 Citation: Panwar, N. and A. Szczepaniec. 2023. Seasonal abundance of a stem-boring pest of quinoa, Amauromyza karli Hendel (Diptera: Agromyzidae) and its implication for pest management. Entomological Society of America Meeting, National Harbor, MD.
  • Type: Conference Papers and Presentations Status: Other Year Published: 2023 Citation: Olson, P. and A. Szczepaniec. 2023. Cultivation and pest assemblages of quinoa: South and North American perspective. Entomological Society of America, Annual Meeting, National Harbor, MD.