Source: TEXAS A&M UNIVERSITY submitted to
VALIDATION OF MICROBIAL PATHOGEN CONTROL ON DRIED RTE SAUSAGES BY NOVEL ANTIMICROBIAL AND MATHEMATICAL APPROACHES.
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
ACTIVE
Funding Source
Reporting Frequency
Annual
Accession No.
1029764
Grant No.
2023-67017-39044
Cumulative Award Amt.
$621,095.04
Proposal No.
2022-09064
Multistate No.
(N/A)
Project Start Date
Jun 1, 2023
Project End Date
May 31, 2027
Grant Year
2023
Program Code
[A1332]- Food Safety and Defense
Project Director
Taylor, M.
Recipient Organization
TEXAS A&M UNIVERSITY
750 AGRONOMY RD STE 2701
COLLEGE STATION,TX 77843-0001
Performing Department
(N/A)
Non Technical Summary
The U.S. Centers for Disease Control and Prevention (CDC) reports multiple outbreaks of human disease resulting from consumption of Salmonella or Shiga-toxigenic E. coli-contaminated uncooked fermented/acidified and semi-dry/dry sausage products, notably salami-style products contaminated during post-lethality handling. The USDA in 2021 identified thelack of sufficient data validating pathogen control on uncooked fermented, dried sausages of differing diameters as a significant research need. The USDA reported manufacturers producing products of differing dimensions dried to the same terminal water activity, without monitoring drying kinetics, possessed insufficientassurance that food safety wassufficiently protected. Through a multidisciplinary approach uniting food processing, food safety microbiology, and predictive modeling, our team will innovate a novel model usefully validating microbial hazard control in fermented, dried sausages varying by size. The model will comprehensively account for changes in sausage physico-chemical characteristics under conditions replicating those occurring commercially. It will also be tested in cooperation with a commercial processor in-plant. Creation and refinement of this mathematical modeling tool will provide critical validation to hazard control for the U.S. meat industry for food safety protection. Planned research will assist in achieving sustainable agriculture goals by reducing food losses due to economic, public health, and nutrition loss consequences inherent to failures in food safety protection.
Animal Health Component
25%
Research Effort Categories
Basic
60%
Applied
25%
Developmental
15%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
7123320110075%
7123320208025%
Goals / Objectives
The over-arching purpose of the proposed research is to improve microbiological safety protection for fermented and dried sausages intended for U.S. consumers.Objectives of outlined research studies and experimental efforts are to:generate data that parameterize the impacts of differing starter cultures and casing diameters on resulting fermentation, water mobility and pathogen control;apply gathered data towards innovation of a new mathematical model that parameterizes sausage manufacturing conditions on consequent pathogen and surrogate survival, and;subject model to early validations by applying microbiological data from pilot and commercial products, using surrogates selected from experimental evaluation and/or review of published data.These are sequenced logically wherein foundational data are first generated, a novel model is innovated by collaborators to identify and test the parameters of sausage manufacture significantly influencing pathogen(s) survival, and then a commercially produced product is tested by the model (see letter of support by commercial manufacturer). Upon completion of research project objectives and research experimentation, investigators expect to have developed, refined, and completed initial validation of a physical+kinetic two component predictive model that accounts for diameter, fat distribution, fermentation endpoint pH, and drying conditions for control of the human pathogensSalmonella enterica, Shiga toxigenicE. coli(STEC), andListeria monocytogenes.
Project Methods
Efforts:All investigators will provide hands-on direct and collaborative teaching/training to recruited graduate and undergraduate project assistants/students, teaching experimental methods of product manufacture, data gathering, use of analytical instruments, data capture from experiments, data storage and preliminary analysis via statistical methods. This will include formal teaching and informal teaching using class settings and research laboratory sessions to train students on how to utilize analytical equipment, how to dispose of spent sample material, how to properly capture data in digital and written forms, how to secure data against theft/copy/loss, and how to enter and analyze data for statistical analysis and interpretation. Investigators will give guidance to students on drafting and editing of volunteered abstracts and manuscripts through one-to-one consultation and/or collaborative writing exercises/sessions.Where useful and appropriate, investigators will coordinate with extension service-appointed specialists to offer research findings for use in workshops and training programs, developing visual aids and/or hands-on teaching exercises in collaboration with extension specialists leading these workshops/events. This will ensure best integration of research findings into the workshop's planned topical discussions and learning by participants. In classes taught by investigators, research findings will be evaluated for integration into formal lecture or class sessions. Additionally, investigators will support one anothers' teaching efforts by coordinated guest presentation either in person or by virtual presentation as a subject matter expert. Investigators will assist recruited graduate students in developing university-approved graduate mentoring committees that facilitate optimal student learning and degree completion.The project leader will facilitate efforts annually by planning team meetings either in concert with national scientific meetings or by virtual meeting (e.g., Zoom) to gather investigator updates, as well as by graduate students who are supported by the project. This will facilitate exchange of knowledge between groups, improvement of planned activities, help collaboratively develop problem solutions, and evaluate best next steps. These sessions will also assist the evaluation of project progression to completion.EvaluationProject leader Taylor will at least annually call investigators together to report on completion of outlined research phases (1-3) against projected timelines, identify obstacles slowing progression of data collection, and identify tangible products (e.g., abstract, papers, presentations, meetings, other impacts). These sessions will allow compilation of data indicative of project completion and/or identification of milestones achieved or exceeded. These will also be used, if needed, to discuss investigator-identified unanticipated research findings that are exciting and warrant more exploration.

Progress 06/01/23 to 05/31/24

Outputs
Target Audience:At Texas A&M, two differing presentations over findings to date were disseminated to members of the College of Agriculture and Life Sciences, as well as across the university (College Station, TX) by the project-supporting student B.E. Ajayi (Animal Science). These presentations allowed the student to gain experience at presenting research data on the topic of the research to agriculture/food-focused and non-focused campus members. These presentations contacted primarily sausage consumers as stakeholders and other scientific researchers in the biological, agricultural, and engineering sciences. In 2023, concurrent with the USDA-NIFA's Investigators' Annual meeting in Toronto, Canada, Co-PI T. Bergholz presented the initial planned project to other attendees, alerting other USDA-funded food safety and defense-contracting researchers to the team's planned work. Dr. Bergholz presented a collaboratively developed project poster and answered questions of USDA and others related to intended research. This presentation contacted USDA-NIFA employees as well as other food safety professionals in government and academia primarily. This relayed the core objectives of the research, the team's logic model for approaching the researchable question(s), and the approach. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?Co-PDs Taylor and Chen met at the 3rd Annual Artificial Intelligence in Agriculture research meeting. Held on the campus of Texas A&M University in April 2024, the third annual Artificial Intelligence in Agriculture conference brought researchers from across the U.S. to Texas A&M to discuss current applications, opportunities, limitations and concerns of AI and machine learning in agricultural production and post-harvest systems. Drs. Chen and Taylor used the meeting as an opportunity to meet with graduate student working on the project, identify possible collaborators to leverage the project into additional research options, and identify next generation grant opportunities for continuing research. Additionally, Drs.Taylor and Chen met with possible research collaborators independently to continue the lines of food safety focused research. Identified line of research for grant development centers on developing modeling approaches to validate safety of stabilized meat products, including large sausage and uncured meats against Clostridium safety hazards by using non-sporeforming surrogate microbes and reactive enzymes. This can leverage this grant into continuing the development of enhanced food safety validation tools for the processed meats industry, helping to secure the future of fully cooked meats manufacture and sale, by reducing the risk of product safety loss, recall, andunavailability to consumers. Drs. Bergholz and Osburn have leveraged the granted project to facilitate training of recruited graduate assistants towards data collection. Dr. Bergholz has been working to complete FSIS-supported CRADA-type research and her lab has assisted in getting data onListeriainitiated for this project. Dr. Osburn has helped Dr. Taylor's group collect preliminary data by allowing his students funded on other aligned projects to assist Dr. Taylor's group by gathering pH and water activity data along with other data, giving Dr. Taylor's recruited graduate assistant added understanding of quality control measures for pH and chemical data gathering from a meat product. The project has allowed the recruitment of a graduate assistant with no functional food/meat science training. The assistantship has allowed the student (B.E. Ajayi) with opportunity to complement previous academic training in microbiology with formal instruction in value-added meats processing and food science/food formulation. How have the results been disseminated to communities of interest?As discussed, results to date have been reported both locally on the TAMU campus as well as nationally through volunteered presentations (see Products citations). These presentations provided opportunity for graduate assistants to gain experience at presentation of research methods and data to non-meat/food safety specialists, as well as to meat processing and safety specialists. Communications of PDs with USDA-FSIS personnel, purposed with obtainingSalmonellaisolates, have also facilitated the relay of preliminary findings and research updates from collaborators/investigators to FSIS personnel. What do you plan to do during the next reporting period to accomplish the goals?Initiation and completion of pathogen-inoculated fermentation and drying monitoring experiments are expected for year 2, completing phases of studies linked to Objective 1 and the first major component of Obj. 2, formulating the predictive model. These experiments will link microbiological with physico-chemical and other data streams, resulting in the multi-variate model put together by Dr. Chen. Researcher Taylorisexploring alternative funds sources to leverage the grant-funded research by preparingSalmonella-inoculated samples that also incorporate USDA-approved phages as an added antimicrobial technology to help achieve a 5.0 log-cycle reduction in the pathogen during fermentation and drying without negatively impacting the metabolic activity of starter cultures. If successful, this would add to the validation of safety of sausages against FSIS standards for minimum pathogen reduction and open a line of research not already ongoing to the researchers awareness. Dr. Osburn will assist researchers in verifying the correct formulation of the salami batter and its stuffing/preparation for inoculated experiments involving sausage fermentation and drying. He will give Dr. Taylor's student added training as needed to help ensure cross-training across meat preparations. Co-PD Chen will receive data towards model design and initial validation work. Co-PDs Taylor and Bergholz will feed data through shared data folders stored in TAMU OneDrive, and through literature reviews with recruited graduate assistants assist Chen in iterative model testing and parameterizations.

Impacts
What was accomplished under these goals? Project Data Generation:PDTaylor initiated recruited graduate student training with collaborative input from Co-PDBergholz to facilitate assembling and activating a collection of O157 and non-O157STEC provided isolates from USDA-ARS personnel. Additionally, as indicated elsewhere in this report, Co-PDBergholz assisted with identifying USDA contacts to provide 10 Salmonella isolates from 9 differing serovars collected from meat manufacturing establishments. USDA personnel were contacted and needed MTA processes completed in order to obtain the organisms from USDA-ARS with FSIS assistance. Following organisms' receipt, the student research assistant was trained and initiatedpreliminary testing to verify the growth kinetics of Salmonella organisms in the medium tryptic soy broth. STEC isolates growth characteristics were known from previously completed/already published research. The growth assay was designed to allow researchers to identify minimum reliable time at 37 C for Salmonella to enter mid-stationary phase, anticipated to provide the greatest degree of tolerance to lactic acid and dehydration processes characteristic of the manufacture of these products. Experimental data from these growth trials demonstrated 14 hr. minimum growth in nutritious medium was required for Salmonella and STEC isolates to achieve 9.0 log-cycles or greater consistently. Dr. Bergholz's group confirmed similar findings in their laboratory andalso demonstrated previously gathered data detailing pH, water activity, and pathogen reductions occurring in similarly formulated salami-style sausages. Dr. Bergholz has reported data to the group from other funded research demonstrating a consistently difficulty in achieving significant declines in Salmonella in smaller diameter sausages versus larger diameter products, potentially the result of moisture migration pattern differences, but is not suspected to be a function of pH differences. We anticipate exploring this more in depth as FSIS personnel have confirmed similar observations anecdotally and it warrants further evaluation. Dr. Bergholz's group has, along with Dr. Taylor's group, initiated the supply of quantitative data to Dr. Chen to initiate the design of a complex predictive model to begin the procedure of developing a primary validation model. Growth kinetic data from Salmonella growth have been supplied to aid model design. Co-PD Chen was supplied data from PD Bergholz to initiate the development of the initial model as well as by PD Taylor, giving parameters ofSalmonellaand STEC growth. In collaboration, Drs. Bergholz and Taylor have initiated experiments to compare quantitatively the counts ofSalmonella,L. monocytogenesand STEC isolates inoculated into a standard salami batter formula (provided and verified by Co-PD Osburn) to track the fermentation of acid from dextrose from each of three differing commercial starter culture products (one powder, one liquid, one frozen concentrate). These experiments will be completed for sausages filled into 19 and 32 mm casings (collagen) to determine if diameter impacts fermentation onset and kinetics. From these samples, pathogen counts forSalmonellawill be compared both by plating and via qPCR (BAX Hygiena) to compare and initiate understanding of whether qPCR can effectively substitute for plate counts. Additionally, researchers will track Ct values forLm-inoculated sausages to quantitate the parameters of PCR-based pathogen detection and relate to counts of pathogen cells, leveraging research funding to add new data to the intended model and improve its industrial usefulness. Co-PD Osburn has led his group in identifying a useful batter and has verified capability to formulate and produce a baseline salami product, as well as experimentally designed a commercial environmental chamber to be able to hold experimental sausage links with wireless data loggers for product temperature and environmental humidity and windspeed. Probes have been identified and obtained allowing for surface temperature and core temperature monitoring, as well as pH and water activity probes for physico-chemical data gathering incrementally. These plans and activities have assisted in researchers nearly completing research studies linked to Objective 1, producing data that are being fed to Co-PD Chen to initiate Objective 2. Team Meetings:A team meeting was held in late August 2023 wherein initial plans were formulated and project-recruited student(s) were introduced to Co-PIs, via Zoom. The project timeline was reviewed for the initial phase of the project, and discussions were held on the topics of starter cultures selection for "worst-case" scenario replication. PIs Bergholz and Taylor agreed to and successfully recruit a selection of Salmonella enterica isolates from the USDA-FSIS that were previously collected from commercial fermented meat and processed meat manufacturing environments. Dr. Bergholz leveraged ongoing research and networks to identify useful USDA points of contact to facilitate the initial outreach leading to investigators' collection of isolates. A second meeting was completed May 2024, wrapping the Spring academic term's completion of research on aligned projects and outlining research goals for the Summer 2024 term and into the Fall term, initiating Year 2 of the project. Data Management Plan Accomplish: Texas A&M Agrilife's use of Microsoft's OneDrive/Sharepoint system is leveraged to create a shared data storing location, allowing research data to be deposited for storage and access by project research personnel. This forms a centralized repository in addition to investigators' respective personal data storage mechanisms/satellite storage forms/sites.

Publications

  • Type: Conference Papers and Presentations Status: Published Year Published: 2023 Citation: Taylor, M., W. Osburn, J. Chen, and T.M. Bergholz. 2023. Validation of microbial pathogen control on dried RTE sausages by novel antimicrobial and mathematical approaches. 2023 U.S. Department of Agriculture - National Institute for Food and Agriculture Investigators Annual Meeting, Toronto, Ontario, Canada.
  • Type: Conference Papers and Presentations Status: Published Year Published: 2024 Citation: Ajayi, B.E., W.N. Osburn, and T.M. Taylor. 2024. Validation of Salmonella and STEC control in uncooked fermented sausage products. 2024 Texas A&M University Student Research Week, College Station, TX.
  • Type: Conference Papers and Presentations Status: Published Year Published: 2024 Citation: Ajayi, B.E., W.N. Osburn, and T.M. Taylor. 2024. Validation of Salmonella and STEC control in uncooked fermented sausage products. Texas A&M University - College of Agriculture and Life Sciences Mini Research Symposium, College Station, TX.
  • Type: Conference Papers and Presentations Status: Published Year Published: 2023 Citation: Harrison, A., A.L. Shimwa, N. Broz, K. Zwally, W. Osburn, A. Pollock, and T.M. Taylor. 2023. Comparing Salmonella enterica to two non-pathogenic surrogates in an uncooked, fermented, and dried sausage process. American Meat Science Association 2023 Reciprocal Meat Conference, Minneapolis, MN.