Source: BOYCE THOMPSON INSTITUTE submitted to NRP
FUNCTIONAL CHARACTERIZATION OF APHID SALIVARY EFFECTORS
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
ACTIVE
Funding Source
Reporting Frequency
Annual
Accession No.
1024774
Grant No.
2021-67013-33565
Cumulative Award Amt.
$440,334.00
Proposal No.
2020-05805
Multistate No.
(N/A)
Project Start Date
Jan 1, 2021
Project End Date
Dec 31, 2025
Grant Year
2021
Program Code
[A1112]- Pests and Beneficial Species in Agricultural Production Systems
Recipient Organization
BOYCE THOMPSON INSTITUTE
TOWER ROAD
ITHACA,NY 14853
Performing Department
(N/A)
Non Technical Summary
Green peach aphids (Myzus persicae) are widely prevalent agricultural pests that reduce yield by consuming plant nutrients and transmitting viruses to numerous fruits, vegetables, and field crops. Aphids feed primarily from the phloem sieve elements of their host plants. In the course of phloem feeding, aphids alternate between secreting protein-containing saliva into sieve elements and ingesting phloem sap. Several studies have demonstrated that specific aphid salivary proteins, also called effectors, play a critical role in successful aphid feeding. Conversely, some salivary proteins elicit visible responses in plant leaves, suggesting that plants recognize these individual aphid proteins and initiate defenses. However, only a few of the likely dozens of proteins in aphid saliva have been characterized, and the functions of most aphid salivary proteins remain completely unknown. The wide host range of green peach aphids suggests that this species has a particularly effective complement of salivary proteins that function both in suppressing plant defenses and in promoting nutrient flow to aphid feeding sites.In the course of this project, the functions of six green peach aphid salivary proteins will be characterized. Two of these proteins appear to elicit plant defense responses. Four others move to specific locations within the plant cells from which the aphids are feeding, suggesting that they have a role in manipulating plant metabolism for the benefit of the aphids. The effects of aphid salivary proteins will be characterized with plant gene expression and metabolite profiling assays. Protein interaction studies will identify plant proteins that contribute to the recognition of aphid feeding, as well as plant proteins that are targeted by the aphids to suppress plant defenses and promote nutrient flow to the site of aphid feeding. Aphid gene expression silencing will determine the extent to which individual salivary proteins are required for successful host plant utilization. Characterization of essential aphid salivary proteins, as well as interactions with endogenous plant proteins, will not only provide a better understanding of factors that contribute to the invasiveness of green peach aphids, but also will enable the implementation of new resistance mechanisms in crop plants through breeding or biotechnology approaches.
Animal Health Component
(N/A)
Research Effort Categories
Basic
100%
Applied
(N/A)
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
2111469104025%
2111469108025%
2111469113025%
2111469100025%
Goals / Objectives
The title of the project, "Functional Analysis of Aphid Salivary Effectors," describes the overall goal, which will be addressed by means of three main objectives:Objective 1: Analyze salivary proteins that induce hypersensitive responsesSome aphid salivary proteins elicit cell death, also called a hypersensitive response, in plants. This suggests that plant cells are killing themselves in a targeted manner to make aphid feeding more difficult. Key goals are to determine whether this hypersensitive response benefits the plants and whether there are specific receptors that plants use to recognize aphid proteins.Objective 2: Determine regulatory functions of salivary proteins in plant nucleiThe apparent targeting of salivary proteins to plant cell nuclei suggests that these proteins may be involved in regulating gene expression. This will be investigated through the transcriptomic studies of plants infected with specific salivary proteins to identify genes that are differentially regulated in response to expression of aphid proteins, as well as in response to actual aphid feeding.Objective 3: Investigate salivary protein targeting to plastids and mitochondriaAnalysis of protein sequences and preliminary localization studies suggest that some aphid salivary proteins may be targeted to chloroplasts or mitochondria. This subcellular targeting will be confirmed with fusion proteins and antibody assays. Further experiments will determine the plant metabolic responses that are triggered by these aphid salivary proteins.
Project Methods
Research approaches will include protein interaction studies and genetic mapping of natural variation in plant responses, which will identify the targets of aphid salivary proteins. The specific effects of salivary proteins on plants will be characterized with transcriptomic and metabolomic assays. Aphid gene expression silencing will determine the extent to which individual salivary proteins are required for successful host plant utilization.

Progress 01/01/24 to 12/31/24

Outputs
Target Audience:The target audience is researchers and plant breeders working in the area of agricultural pest control. By identifying the mechanisms by which aphids influence plant defenses, it will be possible to identify new protein targets for controlling aphid infestations. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?Dr. Leila Feiz, a postdoc working on this project, received further experience in research on plant-insect interactions. Dr. Feiz also received guidance with her job applications and interviews. A graduate student, Syed Najeebullah, received training in plant molecular biology and the preparation of reports about his research. How have the results been disseminated to communities of interest?Two journal publications describing plant-aphid interactions include research that was conducted with funding from this award. Dr. Feiz presented the research on AAF1 in three invited talks entitled 'Investigating the Interplay of Factors in Plant Cell Physiology and Development' at the Institute of Biological Chemistry, Washington State University, Pullman; the Department of Biology, Purdue University, Fort Wayne (both in person); and for scientists at the Cotton Fiber Bioscience & Utilization Research Unit, USDA-ARS, Southern Regional Research Center (via Zoom). What do you plan to do during the next reporting period to accomplish the goals?In the next reporting period we will continue research on autophagy induction by aphid salivary proteins. Research results will be published. An undergraduate student will receive research training.

Impacts
What was accomplished under these goals? By generating and analyzing Arabidopsis plants transformed with autophagy-related factor 1 (AAF1, formerly SP11), it was shown that the expression of AAF1 in Arabidopsis significantly increases rosette size. This increase is autophagy-related, as it does not occur in the Arabidopsis autophagy mutant atg5, which was also transformed with the AAF1 effector. Optimized methods and demonstrated that AAF1 induces autophagy flux in the vacuoles of Nicotiana benthamiana leaves by showing an increase in mCherry to mCherry-ATG8d, which is a standard method for measuring autophagy flux. Performed a large-scale lipidomics analysis on Nicotiana benthamiana leaves transiently expressing different levels of AAF1 and or GFP control protein and demonstrated that AAF1 increases the abundance of sphingolipids, sterols, and triglycerides in leaves expressing AAF1 compared to control leaves overexpressing GFP. The observed increase in triglycerides and esterified sterols supports the hypothesis that AAF1 plays a role in the recruitment of lipid droplets to starvation-induced autophagosomes. It is well established that the induction of autophagy requires extensive lipid remobilization and recruitment and that triglycerides and esterified sterols constitute the major components of lipid droplets. Reciprocal interaction assays demonstrated that a plant phosphatidylinositol transfer protein binds to AAF1. The binding of AAF1 to this lipid transfer protein, along with its interaction with RabD1/D2a--two major vesicle trafficking proteins involved in autophagosome formation--further confirmed that AAF1 confers its function by facilitating lipid and vesicle remobilization. This process provides the essential components for the formation of aphid-mediated starvation-induced autophagosomes.

Publications

  • Type: Other Journal Articles Status: Published Year Published: 2025 Citation: Negin, B, Wang, F., Fischer, H.D., and Jander, G. (2025) Acylsugars, nicotine, and a protease inhibitor provide variable protection for Nicotiana benthamiana in a natural setting, Plant Cell and Environment, 48:1073-1087
  • Type: Other Journal Articles Status: Published Year Published: 2025 Citation: Najeebullah S, Umer N, Zahra Naqvi R, Arshad M, Jander G, Asad S, Mukhtar Z, Asif M. (2025) Transgenic cotton expressing Allium sativum leaf agglutinin exhibits resistance to whiteflies and aphids without negative effects on ladybugs


Progress 01/01/23 to 12/31/23

Outputs
Target Audience:The target audience is researchers working in the area of agricultural pest control. By identifying the mechanisms by which aphids suppress plant defenses, it will be possible to identify new protein targets for controlling aphid infestations. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?A postdoc, Dr. Leila Feiz, received futher experience in plant-aphid interactions and protein biochemistry research. An undergraduate student received training from Dr. Feiz through this project. How have the results been disseminated to communities of interest?Two reseach articles related to aphid-plant interactions were published in the past year. Both include research funded by this award. A postdoc, Dr. Leila Feiz, presented a talk at an Autophagy Gordon Conference. Georg Jander presented a talk describing results from this research at Cornell University. What do you plan to do during the next reporting period to accomplish the goals?We will finish analysis of autophagy suppression by aphid salivary proteins. Results of this research will be submitted for publication. An undergraduate student will receive research research training.

Impacts
What was accomplished under these goals? Research in the past year was focused mainly on verifying in vivo interactions between an aphid salivary protein and plant proteins involved in triggering autophagy. This included pull-down experiments, fluorescence complementation, and analysis of plant gene expression in response to expression of the salivary protein. These results conclusively showed an induction of autophagy, a function that has not been previously confirmed as a function during aphid feeding. Additionally, new evidence shows that the protein actually is injected into the plant during aphid feeding, rather than just being collected from artificial diet on which aphids are feeding.

Publications

  • Type: Journal Articles Status: Published Year Published: 2024 Citation: Serine proteinase inhibitors from Nicotiana benthamiana, a nonpreferred host plant, inhibit the growth of Myzus persicae (green peach aphid). Feng H, Jander G. Pest Manag Sci. 2024 Sep;80(9):4470-4481. doi: 10.1002/ps.8148
  • Type: Journal Articles Status: Accepted Year Published: 2024 Citation: Negin, B, Wang, F., Fischer, H.D., and Jander, G. (2024) Acylsugars, nicotine, and a protease inhibitor provide variable protection for Nicotiana benthamiana in a natural setting, Plant Cell and Environment, in press.


Progress 01/01/22 to 12/31/22

Outputs
Target Audience:The target audience is researchers working in the area of agricultural pest control. By identifying the mechanisms by which aphids suppress plant defenses, it will be possible to identify new protein targets for controlling aphid infestations. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?Leila Feiz, a postdoc working on this project, received training in research on plant-insect interactions. An undergraduate student, Miguel Barrera, received training in plant molecular biology and the preparation of reports about his research. How have the results been disseminated to communities of interest?A paper has been published describing aphid RNA interference methods that were developed with funding from this project. Research related to this project was presented in the form of a poster in a symposium at Cornell University. What do you plan to do during the next reporting period to accomplish the goals? In the next reporting period, we will continue our functional analysis of two aphid salivary proteins. We will publish a paper about SP11. In a new direction, we will be looking for protein-small molecule interactions in aphid saliva that could be an indication of enzymatic activity.

Impacts
What was accomplished under these goals? We have focused research primarily on studying the function of the SP11 aphid salivary protein in the past year. Several lines of evidence suggest that it may be a specific trigger of autophagy in plant cells. These include Inhibitors of autophagy reduce the effects of SP11 Co-immunoprecipitation with known autophagy-related proteins Biomolecular fluorescence complementation assays Subcellular localization of fusion proteins Increased ubiquitination of plant proteins RNA interference of aphid SP11 gene expression when feeding on plants In separate experiments, we have been developing assays and methods for RNA interference in aphids. Horizontally transferred genes, but also SP11, were targets in these experiments. There are potential practical applications both for aphid research and in pest control.

Publications

  • Type: Journal Articles Status: Published Year Published: 2023 Citation: Feng H, Chen W, Hussain S, Shakir S, Tzin V, Adegbayi F, Ugine T, Fei Z, Jander G. (2023) Horizontally transferred genes as RNA interference targets for aphid and whitefly control. Plant Biotechnol J. doi: 10.1111/pbi.13992. Online ahead of print


Progress 01/01/21 to 12/31/21

Outputs
Target Audience:The target audience is researchers working in the area of agricultural pest control. By identifying the mechanisms by which aphids suppress plant defenses, it will be possible to identify new protein targets for controlling aphid infestations. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?Leila Feiz, a postdoc working on this project, received training in research on plant-insect interactions. An undergraduate student, Miguel Barrera, received training in plant molecular biology and the preparation of reports about his research. How have the results been disseminated to communities of interest?Leila Feiz presented a talk about this research at the American Society of Plant Biologists annual meeting in 2021. What do you plan to do during the next reporting period to accomplish the goals?In the next reporting period, we will continue our functional analysis of two aphid salivary proteins: SP11, which elicits autophagy in plant cells, and SP15, which moves to the nucleus and binds to plant transcription factors.

Impacts
What was accomplished under these goals? From a pool of 48 aphid salivary proteins that we transiently expressed in Nicotiana benthamiana, we chose two proteins, SP11 and SP15, for further analysis as part of Objectives 1 and 2. Objective 1: Analyze salivary proteins that induce hypersensitive responses An aphid salivary protein, SP11, was found to induce a hypersensitive response in Nicotiana benthamiana. Further experiments with N. benthamiana plants transiently expressing SP11 showed that aphids reproduce better on plants expressing SP11 than on empty vector control plants. This suggested that the cell death is selectively induced by aphids, rather than being a plant defense response. Antibodies raised against SP11 showed that the protein is injected into plants when aphids are feeding. Co-immunoprecipitation and bimolecular fluorescence complementation assays showed that SP11 interacts with proteins that are localized in the plant peroxisomes. One of the co-localize proteins was catalase, which appeared to be degraded in response to SP11 overexpression in N. benthamiana. Concomitant over expression of catalase with SP11 reduced cell death in N. benthamiana. Objective 2: Determine regulatory functions of salivary proteins in plant nuclei Based on GFP fusions, the SP15 protein was found to be localized to the cell nuclei in N. benthamiana plants on which the aphids were feeding. Pull-down experiments and proteomic analysis of plant proteins interacting with SP15 indicated that this protein is interacting with at least two different N. benthamiana transcription factors. Thus, SP15 is likely to alter plant gene expression. Objective 3: Investigate salivary protein targeting to plastids and mitochondria In the current project year, no research was done on proteins that are targeted to plastids or mitochondria.

Publications