Source: CORNELL UNIVERSITY submitted to NRP
THE USE OF BRETTANOMYCES CLAUSSENII FOR THE PRODUCTION OF VALUE-ADDED GOODS FROM AGRICULTURAL BY-PRODUCTS
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
1022962
Grant No.
2020-67034-31743
Cumulative Award Amt.
$120,000.00
Proposal No.
2019-07300
Multistate No.
(N/A)
Project Start Date
Jun 15, 2020
Project End Date
Jun 14, 2022
Grant Year
2020
Program Code
[A7101]- AFRI Predoctoral Fellowships
Recipient Organization
CORNELL UNIVERSITY
(N/A)
ITHACA,NY 14853
Performing Department
Food Science
Non Technical Summary
In the United States the popularity of Greek yogurt has brought a disposal issue for its byproduct, acid whey. Currently acid whey is applied as fertilizers, added to animal feed, or disposed of through costly neutralization methods. Strain is placed on the environment through disposal and on the dairy manufacturer through economic burden. However, there is opportunity to upcycle this byproduct and take advantage of its valuable components including vitamins, minerals and sugar. The main sugar in acid whey, lactose, can be converted to acetic acid through fermentation with the yeast Brettanomyces claussenii. Historically, whey has been used as a base for beverages and wellness tonics and today, beverages containing acetic acid are becoming popular among consumers for health benefits. Fermentation of acid whey with this yeast, B. claussenii, has the potential to create novel, dairy-based acetic acid beverages. Traditional food fermentation yeast, S. cerevisiae, does not have this ability to ferment lactose, therefore B. claussenii is an ideal option. However, little information is available on how to perform lactose fermentations with this yeast or on how it has the ability to do this.This project will study B. claussenii in lactose fermentations in order to characterize its behavior and optimize standard operating procedures for potential dairy-based fermentations. This will be done through screening yeast and fermentation conditions with a synthetic lactose fermentation and then through fermentation of acid whey. Molecular biology techniques will also be used to look into the genome of B. claussenii and determine how it is able to metabolize lactose, important information needed to further characterize this organism's ability to be used in lactose fermentations. Outcomes of this project will positively impact the dairy industry through utilization of waste streams and expansion of the market through development of value-added beverages.
Animal Health Component
50%
Research Effort Categories
Basic
50%
Applied
50%
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
4034020106050%
5023470106050%
Goals / Objectives
The overall goals of this research are to i) establish data and knowledge in the transformation of lactose from dairy waste streams into acetic acid through the use of the yeast Brettanomyces claussenii with an overarching theme of producing value-added beverages with a recycled food waste and ii) to determine and characterize the mechanism for lactose metabolism within this yeast in order to gain more knowledge on this species for future lactose fermentations. This will be done through two sepcific objectives:1. Evaluate and optimize the production of acetic acid by B. claussenii from lactose and lactose containing dairy by-products, like acid whey.2. Identify gene(s) responsible for lactose utilization in B. claussenii through molecular biology techniques.
Project Methods
Objective I:Strains of B. claussenii will be screened for production of acetic acid using synthetic lactose mediaEfficient strains will be further optimized for acetic acid production through fermentation of lactose media and acid whey using factorial designLevels of acetic acid, lactose, and glucose will be monitored through HPLC analysisSignificant differences between strains and fermentation conditions will be analyzed through ANOVAObjective II:A putative beta-galactosidase sequence will be used to perform a gene knockout in B. claussenii.The mutants will be screened for lactose positive activityThe same putative gene will be cloned into S. cerevisiae.Clones will be screened for lactose positive activitySuccess of gene knock out (loss of lactose activity) and success of gene cloning (gain of lactose activity) will indicate this gene's role in lactose utilization for B. claussenii.Efforts:Results will be relayed to target audiences via scientific communications and presentations.Evaluation:This project lays the foundational work for use of B. claussenii to create value-added product from dairy byproducts. Future adoption of this knowledge within industry will be used to evaluate project success.

Progress 06/15/20 to 06/14/22

Outputs
Target Audience:The scientific community within food and agriculture will be targeted for disseminating research results and methods through scientific publications. The data obtained and methods used during this study will benefit other researchers in order to further the research in this area. Additionally, the results from this study will be relayed to dairy farmers and processors through discussion of methods that can be used in industry to adopt practices for valorization of waste products. Finally, the broad consumer community will be targeted in order to promote and educate on the benefits of value-added, by-products goods in achieving sustainability. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?The Project Director, Marie Lawton, has participated in several professional development and training activities during the reporting period for this project. In order to increase her knowledge and expertise in the area of food science she has participated in two professional development workshops offered by the Cornell Dairy Foods Extension. The workshops resulted in earning certificates in the following: The Science of Cheese - Basic Level and FSPCA Preventive Controls Qualified Individual. In order to increase her training in professional skills, she attended the New York (NY) ComSciCon, Science Communication Conference in order to gain valuable training and experience in disseminating scientific information to broad audiences. Marie has presented the results of her project at the annual conference of the American Dairy Science Association. Additionally, Marie has taken several academic courses at Cornell during this reporting period which have added to her professional development and professional technical skills. These courses include Public Speaking, Introduction to Python, Project Management, and Food Science Seminar. How have the results been disseminated to communities of interest?In order to reach communities of interest, we have targeted the scientific community in the broad food science category as well as more specifically in dairy science. A review highlighting biotechnological options for the use of the lactose-consuming yeast, Brettanomyces claussenii, has been disseminated to the food science community through publication of a literature review in the journal Current Opinion of Food Science. This review will increase awareness and research in the area of dairy by-product valorization through biotechnological approaches. Additionally, an posterof the results obtained in Objective 1 has been presented at the Annual Meeting of the American Dairy Science Association. This conference is attended not only by dairy scientists but also dairy processors and farmers allowing for dissemination of our work to target audiences and broadening the awareness of this research and opportunities. What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? In the dairy industry significant disposal issues and sustainability concerns arise over lactose-containing dairy by-products such as acid whey. Current options for disposal of these acidic, lower protein waste streams are limited and are either financially limited or not environmentally friendly. Although not efficient for protein and whey powder production, valuable components are still present in these waste streams such as vitamins, minerals, protein, and lactose. Research into alternative options for valorization of these dairy by-products is essential in order to promote sustainability within the industry and expand marketplace options for dairy goods. This work directly impacts dairy processors by expanding research on options for by-product reutilization. Additionally, the results of this research provide the scientific community with more information to expand further opportunities. Objective 1 of this project includes an evaluation and optimization of lactose fermentations with the yeast Brettanomyces claussenii. For this reporting period, we have completed a response surface and optimization experiment.The results of this experiment will be used to better inform the design of an optimization model with the goal of maximizing acetic acid production from lactose during fermentation with this yeast. Within Objective 2 of this project, we have successfully identified a putative beta-galactosidase (lactase) gene within the yeast B. claussenii using bioinformatic approaches. In order to prove identity and characterize this gene for lactose hydrolysis activity, we have completed a screen of various strains of yeast for the presence of the putative gene. We have also been successful in the preliminary steps for transformation of this gene into a non-lactose utilizing yeast (Saccharomyces cerevisiae) to prove gene identity. From the screening of seven strains of the lactose-consuming yeast, B. claussenii, all but 1 strain showed presence of the putative beta-galactosidase gene. This result was confirmed with lactose consumption activity seen in all but this yeast as described in Objective 1. This gene was successfully transformed into S. cerevisiae and theevaluation of lactose hydrolysis activity was seen whichproves gene identity. The work we have accomplished within this project directly addresses the issue of dairy waste stream valorization. We have gathered valuable information into the use of the lactose-consuming yeast, B. claussenii, for production of value-added goods from dairy byproducts. A literature review on this topic has been published to the journal Current Opinion of Food Science and an abstract of the results from Objective 1 has been accepted for presentation at the Annual Meeting of the American Dairy Science Association in July 2021. These results provide more knowledge on how this yeast behaves in lactose fermentations as well as information on the mechanism behind this lactose hydrolysis activity, providing options for its use as a biotechnological approach to promoting sustainability in the dairy industry.

Publications

  • Type: Journal Articles Status: Published Year Published: 2021 Citation: Lawton, M. R., deRiancho, D. L., & Alcaine, S. D. (2021). Lactose utilization by Brettanomyces claussenii expands potential for valorization of dairy by-products to functional beverages through fermentation. Current Opinion in Food Science.
  • Type: Journal Articles Status: Other Year Published: 2023 Citation: Lawton, M. R., Jencarelli, K. G., DeMarsh, T. D., & Alcaine, S. D. (TBD). Optimization of acetic acid production from lactose by fermentation with Brettanomyces claussenii using response surface methodology to direct utilization of acid whey and other dairy by-products.


Progress 06/15/20 to 06/14/21

Outputs
Target Audience:The scientific community within food and agriculture will be targeted for disseminating research results and methods through scientific publications. The data obtained and methods used during this study will benefit other researchers in order to further the research in this area. Additionally, the results from this study will be relayed to dairy farmers and processors through discussion of methods that can be used in industry to adopt practices for valorization of waste products. Finally, the broad consumer community will be targeted in order to promote and educate on the benefits of value-added, by-products goods in achieving sustainability. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?The Project Director, Marie Lawton, has participated in several professional development and training activities during the reporting period for this project. In order to increase her knowledge and expertise in the area of food science she has participated in two professional development workshops offered by the Cornell Dairy Foods Extension. The workshops resulted in earning certificates in the following: The Science of Cheese - Basic Level and FSPCA Preventive Controls Qualified Individual. In order to increase her training in professional skills, she attended the New York (NY) ComSciCon, Science Communication Conference in order to gain valuable training and experience in disseminating scientific information to broad audiences. Additionally, Marie has taken several academic courses at Cornell during this reporting period which have added to her professional development and professional technical skills. These courses include Public Speaking, Introduction to Python, Project Management, and Food Science Seminar. How have the results been disseminated to communities of interest?In order to reach communities of interest, we have targeted the scientific community in the broad food science category as well as more specifically in dairy science. A review highlighting biotechnological options for the use of the lactose-consuming yeast, Brettanomyces claussenii, has been disseminated to the food science community through publication of a literature review in the journal Current Opinion of Food Science. This review will increase awareness and research in the area of dairy by-product valorization through biotechnological approaches. Additionally, an abstract of the results obtained so far for Objective 1 has been submitted for presentation at the Annual Meeting of the American Dairy Science Association. This conference is attended not only by dairy scientists but also dairy processors and farmers allowing for dissemination of our work to target audiences and broadening the awareness of this research and opportunities. What do you plan to do during the next reporting period to accomplish the goals?We plan to build on the current results within the next reporting period to accomplish the remaining goals of the project. For Objective 1 this will be done through designing a response surface model to evaluate optimum fermentation characteristics needed for maximum production of acetic acid from a model lactose-containing substrate. The results from this experiment will be validated with further fermentations at the optimum conditions in dairy by-products. This information will be disseminated to the scientific community through publication of the results in a relevant journal in order to advance research in this area. For Objective 2 of this project, the yeast transformed with the putative beta-galactosidase gene will be evaluated for lactose hydrolysis activity. Successful hydrolysis activity will confirm identity of this gene, and the resulting enzyme will be characterized in terms of enzyme kinetics at various pH and temperature levels. The results from these experiments will also be disseminated to the scientific community through publication in a relevant journal. The knowledge gained in this part of the project will expand on the opportunities available for use of the yeast B. claussenii in lactose fermentations for dairy by-product valorization.

Impacts
What was accomplished under these goals? In the dairy industry significant disposal issues and sustainability concerns arise over lactose-containing dairy by-products such as acid whey. Current options for disposal of these acidic, lower protein waste streams are limited and are either financially limited or not environmentally friendly. Although not efficient for protein and whey powder production, valuable components are still present in these waste streams such as vitamins, minerals, protein, and lactose. Research into alternative options for valorization of these dairy by-products is essential in order to promote sustainability within the industry and expand marketplace options for dairy goods. This work directly impacts dairy processors by expanding research on options for by-product reutilization. Additionally, the results of this research provide the scientific community with more information to expand further opportunities. Objective 1 of this project includes an evaluation and optimization of lactose fermentations with the yeast Brettanomyces claussenii. For this reporting period, we have completed a yeast strain evaluation and fermentation factor screen. Various strains of the lactose-consuming yeast, B. claussenii, were evaluated for their ability and efficiency in consuming the milk sugar lactose and producing acetic acid, a valuable end product for value-added goods. Acetic acid levels were measured during fermentation of lactose for each strain. From this data of the yeast evaluated, a prominent strain (significant acetic acid produced, P<0.05) was chosen to move forward with for further experiments. Using statistically designed experiments, several factors (temperature, pH, time, sugar concentration, yeast inoculation level) were incorporated into a factorial design and screened for their significance to acetic acid production during fermentation of a synthetic lactose substrate with this yeast. The results of this experiment will be used to better inform the design of an optimization model with the goal of maximizing acetic acid production from lactose during fermentation with this yeast. Within Objective 2 of this project, we have successfully identified a putative beta-galactosidase (lactase) gene within the yeast B. claussenii using bioinformatic approaches. In order to prove identity and characterize this gene for lactose hydrolysis activity, we have completed a screen of various strains of yeast for the presence of the putative gene. We have also been successful in the preliminary steps for transformation of this gene into a non-lactose utilizing yeast (Saccharomyces cerevisiae) to prove gene identity. From the screening of seven strains of the lactose-consuming yeast, B. claussenii, all but 1 strain showed presence of the putative beta-galactosidase gene. This result was confirmed with lactose consumption activity seen in all but this yeast as described in Objective 1. Moving forward, once this gene is successfully transformed into S. cerevisiae, evaluation of lactose hydrolysis activity will be performed to prove gene identity. The work we have accomplished so far within this project directly addresses the issue of dairy waste stream valorization. We have gathered valuable information into the use of the lactose-consuming yeast, B. claussenii, for production of value-added goods from dairy by-products. A literature review on this topic has been published to the journal Current Opinion of Food Science and an abstract of the results from Objective 1 has been accepted for presentation at the Annual Meeting of the American Dairy Science Association in July 2021. These results provide more knowledge on how this yeast behaves in lactose fermentations as well as information on the mechanism behind this lactose hydrolysis activity, providing options for its use as a biotechnological approach to promoting sustainability in the dairy industry.

Publications

  • Type: Journal Articles Status: Published Year Published: 2021 Citation: Lawton, M. R., deRiancho, D. L., & Alcaine, S. D. (2021). Lactose utilization by Brettanomyces claussenii expands potential for valorization of dairy by-products to functional beverages through fermentation. Current Opinion in Food Science.