Source: UNIV OF WISCONSIN submitted to
ADVANCED TECHNOLOGIES FOR THE GENETIC IMPROVEMENT OF POULTRY
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
NEW
Funding Source
Reporting Frequency
Annual
Accession No.
1016808
Grant No.
(N/A)
Project No.
WIS02069
Proposal No.
(N/A)
Multistate No.
NC-1170
Program Code
(N/A)
Project Start Date
Oct 1, 2018
Project End Date
Sep 30, 2021
Grant Year
(N/A)
Project Director
Sunde, R.
Recipient Organization
UNIV OF WISCONSIN
21 N PARK ST STE 6401
MADISON,WI 53715-1218
Performing Department
Nutritional Sciences
Non Technical Summary
The feed industry now promotes use of dietary organic selenium (Se) and supplementation with higher levels of Se for animals. There are currently no identified biomarkers of High-Se status. We previously determined Se requirements for turkeys fed inorganic Se using traditional and selenoprotein mRNA biomarkers, but did not find good biomarkers for supernutritional Se status. Specifically, we now propose to (1) determine Se regulation of traditional biomarkers of Se status (growth, tissue Se concentration and selenoenzyme activity level) in turkeys fed High-Se diets as inorganic Se, to identify potential biomarkers of High-Se status and to better understand the result of high-Se supplementation; (2) In turkey poults fed Se-deficient to High-Se diets as inorganic Se, determine Se regulation of the complete transcriptome in liver using RNA-Seq, to identify biomarkers of supernutritional-, high- and toxic-Se status, to better understand how the turkey adapts to High-Se status, and to better define safe upper limits of Se supplementation; (3) in turkey poults supplemented with organic Se, (a) determine Se regulation of traditional biomarkers of Se status and (b) determine the Se regulation of the complete transcriptome in liver using RNA-Seq, to better characterize the effects of organic vs. inorganic Se supplementation, and to determine minimum dietary Se requirements and safe upper limits for organic Se supplementation. These studies will help to better evaluate the levels and benefits of organic vs. inorganic Se supplementation. These tools and our continued emphasis on their development and application are essential for improving efficiency of the birds directly (genotype selection) and indirectly (the management system, e.g.,nutrition).
Animal Health Component
40%
Research Effort Categories
Basic
75%
Applied
25%
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
3023230101050%
3023230104050%
Goals / Objectives
Create and share data and technology to enhance the development and application of genomics, epigenomics, and systems biology in poultry.
Project Methods
The following briefly summarize methods that will be used in these studies. We have published use of all cited methods, except RNA-Seq, previously.D1. Poults- Male one-day-old poults will be donated by Jennie-O Turkey Store, Barron WI, and housed in electrically-heated battery brooder cages with raised wire floors in air-conditioned animal quarters (72oF) at the UW Poultry Research Lab (PRL) as described previously. The animal care and treatment protocol is approved by the University of Wisconsin Institutional Animal Care and Use Committee.D2. Poult diets- The diet will be the diet used previously, including supplemental adequate vitamin E, that promotes reasonable growth. This is a Se-deficient semi-purified diet (7 ng Se/g diet, 30% low-Se torula yeast plus 7% additional crystalline amino acids) matching NRC requirements. The poults will be fed the basal diet supplemented with graded levels of Se for 28 d. The Se content of each diet will be confirmed by neutron activation analysis.D3. Tissue Analysis- Poults will be killed by CO2 overexposure followed by exsanguination. Blood will be collected into heparin or EDTA-containing syringes, and tissues (liver, heart, gizzard, kidney, thigh and breast muscle, pancreas, testes) rinsed in 0.15 M KCl and quick frozen.D4. Enzyme Activity Assays- Plasma glutathione peroxidase (Gpx3) and RBC Gpx1 activity are determined, and Gpx1, Gpx4, and thioredoxin reductase (Txnrd) activities determined in the tissues. Protein concentration of each sample is determined by the method of Lowry et al.D5. Total RNA isolation- Under a fume hood, total RNA from the tissues (50-100 mg tissue, n=4-5/diet group) is isolated using the guanidinium isothiocyanate method with TRIzol Reagent (cat. #15596-026, Invitrogen, Carlsbad, CA), following the manufacturer's protocol.D6. Tissue and diet Se determination- Liver and muscle tissue (on dry ice) and diet samples will be shipped from the University of Wisconsin to the University of Missouri Research Reactor (MURR). Se will be analyzed using neutron activation.D7. qPCR- Quantitative real time polymerase chain reaction (qPCR) will be used to determine the levels of selenoprotein mRNA and of non-selenoprotein mRNA in total RNA isolated from tissues.D8. mRNA sequencing- Isolated total liver RNA will be submitted to the UW Sequencing Center. Briefly, RNA will be subjected to quality control, filtered to select polyA RNA (mRNA), Mg fractionated, tagged-cDNA libraries generated, and then subjected to Illunina HiSeq2500 sequencing (minimum 250M reads/library), to generate the FASTQ data files for each sample. Due to the relatively new turkey draft genome sequence and annotation, paired-end sequencing will be performed as advocated by Dr. Kent Reed.D9. RNA-Seq data analysis- In collaboration with Dr. Kent Reed (U Minn), the resulting FASTQ data files will be mapped to the updated turkey genome annotation, and differential expression due to Se status determined for the entire turkey transcriptome, including subsequent gene ontology (GO) analysis.D10. Se-response curves- Our research generates Se-response curves for various biomarkers that collectively describe the Se status of an organism. We use breakpoint analysis to compare parameters in terms of minimum Se requirement, where the plateau breakpoint is defined as the intersection of a line tangent to the steepest slope and the plateau line. These breakpoints are the minimum dietary Se requirement for that biomarker. These curves will be used to assess Se status and determine Se requirements, and a similar approach will be used for assessment of ULs.D11. Statistics-All analyses, except for RNA-Seq, will be conducted with statistical software available in our lab.

Progress 10/01/19 to 09/30/20

Outputs
Target Audience:This project focused on developing tissue mRNA levels as molecular biomarkers of nutrient status, using Se regulation of selenoprotein mRNAs in RNA from whole blood and other tissues as an example. This project is also determined dietary Se requirements for turkeys and assessing the safety of higher levels of Se supplementation. These studies have broad implications for small animal and large animal nutrition, as well as human nutrient assessment. The novel new identification of selenosugars as biomarkers of Se status, especially excess Se, is huge. Thus, the target audience for this work includes fellow researchers, producers and farmers, and the feed industry, but also government agencies and other bodies involved in setting nutrient requirements for animals and humans. Changes/Problems:In the studies, we found that liver Se in turkey poults fed 5 μg Se/g diet as Na2SeO3 increased 6-fold as compared to turkeys fed Se-adequate diet (0.4 μg Se/g), but that this increased Se was not due to increases of Se in selenoproteins or accompanied by changes in transcript expression. Thus, we are now studying the nature of the Se species that accumulate in avians and mammals fed high Se, using HPLC-ICP-MS and HPLC-ESI-MS/MS. This research may identify potential biomarkers for high Se status and help to determine upper limits for dietary Se supplementation. What opportunities for training and professional development has the project provided?A graduate student is being trained through this project and is seeking an advance degree in nutritional sciences so that she could take graduate classes and conduct the outlined studies. How have the results been disseminated to communities of interest?See Products and Other Products What do you plan to do during the next reporting period to accomplish the goals?In the next period, we will continue to analyze the low molecular weight Se metabolites in turkeys fed high Se, and this work will expand to look for selenosugar metabolites in rats as a model for humans and higher animals, to better understand Se toxicity and to potentially identify biomarkers for high Se status.

Impacts
What was accomplished under these goals? There is increasing interest in supplementing animals and humans with selenium (Se) at dietary levels above those that raise selenoproteins to Se-adequate plateau levels. The only quantifiable biomarker for Se toxicity, however, currently appears to be tissue Se, which does not plateau. We targeted the liver because turkey poults fed 5 μg Se/g have hepatic Se concentrations 6-fold above levels in poults fed Se-adequate diet (0.4 μg Se/g as selenite) but without apparent effects on growth or health. To assess the full turkey transcriptome for the effect of Se status from Se-deficient to high-Se, we conducted RNA-Seq analysis on liver mRNA from turkey poults fed 0, 0.025, 0.4, 0.75 and 1.0 μg Se/g diet in experiment 1, and fed 0.4, 2.0 and 5.0 μg Se/g in experiment 2. Our objectives were (1) to identify transcript biomarkers for high Se status, which in turn would (2) suggest proteins and pathways used by animals to adapt to high Se. In publications reported this year, the major effect of Se-deficiency was to down-regulate expression of a subset of selenoprotein transcripts in liver, with little significant effect on general transcript expression. In response to high Se intake (2 and 5 μg Se/g) relative to Se-adequate turkeys, no transcript showed a consistent pattern of altered expression in response to high Se intakes across the 1, 2 and 5 μg Se/g treatments, and there were no associated metabolic pathways and biological functions that were significant and consistently found with high Se supplementation. A comparison of differentially expressed transcript sets with high Se transcript sets identified in parallel studies in rats fed 2 and 5 μg Se/g, or by gene set enrichment analysis, also failed to identify common differentially expressed transcripts between these two species. Collectively, these studies indicate that neither avians nor mammals alter gene expression as a homeostatic mechanism to adapt to high Se. This work was published in PloSOne and J. of Nutrition. In collaboration with the CNRS/UPPA, Institute for Analytical Sciences and Physical Chemistry for the Environment and Materials (IPREM), in Pau, France, we characterized and quantitated the low molecular weight species of Se that accumulate in turkeys fed high inorganic Se using HPLC followed by ICP tandem MS. These analyses showed for the first time that supplementation of a monogastric animal with inorganic Se(IV) leads to the synthesis of only selenocysteine, with no synthesis of selenomethionine. In high Se turkey liver, excess Se(IV) is metabolized to selenosugar (SeGalNac) which reacts with low molecular weight thiols and with cysteine-containing peptides and proteins present in liver. These "selenosugar-decorated" proteins account for half of liver Se in Se-adequate as well as high-Se turkey liver. Conversion of Se to selenosugar to form glutathionyl-SeGalNac and methyl-SeGalNac has been well-reported, but our new finding is that "selenosugar-decorated" proteins can account for half or more of the Se in Se-adequate and high-Se liver, at least in the turkey. These selenosugar metabolites have potential to be excellent biomarkers for high Se status in animals and humans. This work was published in Metallomics.

Publications

  • Type: Journal Articles Status: Published Year Published: 2020 Citation: Taylor RM, Mendoza KM, Abrahante JE, Reed KM, Sunde RA. 2020. The hepatic transcriptome of the turkey poult (Meleagris gallopavo) is minimally altered by high inorganic dietary selenium. PLoS One 15: e0232160. PMID: 32379770
  • Type: Journal Articles Status: Published Year Published: 2020 Citation: Bierla K, Taylor RM, Szpunar J, Lobinski R, Sunde RA. 2020. Identification and determination of selenocysteine, selenosugar, and other selenometabolites in turkey liver. Metallomics 12: 758-766. PMID: 32211715
  • Type: Book Chapters Status: Published Year Published: 2020 Citation: Sunde RA. 2020. Impact of high dietary selenium on the selenoprotein transcriptome, selenoproteome, and selenometabolites in multiple species. In: Selenium Research for Environment and Human Health: Perspectives, Technologies and Advancements (Banuelos G., Lin Z. Q., Liang D. & Yin X. B., eds.), pp. 159-160. Taylor and Francis, London
  • Type: Conference Papers and Presentations Status: Published Year Published: 2020 Citation: Sunde RA, Taylor RM. 2020. Impact of high dietary selenium on the transcriptome and selenometabolites in turkeys. Plant Anim Genom. XXVIII: W882 (abs.)
  • Type: Conference Papers and Presentations Status: Published Year Published: 2020 Citation: Sunde RA, Bierla K, Taylor RM, Szpunar J, Lobinski R. 2020. Selenosugars are the major selenometabolites in liver of turkeys fed high selenium. Curr Dev Nutr. 4 (Suppl 2): 1840. doi.org/10.1093/cdn/nzaa067_067 (abs)
  • Type: Journal Articles Status: Awaiting Publication Year Published: 2020 Citation: Sunde RA. 2020. Gene set enrichment analysis of selenium-deficient and high-selenium rat liver transcript expression and comparison with turkey liver expression. J Nutr. Accepted 10/1/20 PMID: 33245116 DOI: 10.1093/jn/nxaa333


Progress 10/01/18 to 09/30/19

Outputs
Target Audience:The potential to develop quick and relatively inexpensive means to assess nutrient status on an individual basis, and to provide and monitor therapy is huge. Thus, the target audience for this work includes fellow researchers, producers and farmers, and the feed industry, but also government agencies and other bodies involved in setting nutrient requirements for animals and humans. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?This grant provided support for a graduate student seeking an advance degree in nutritional sciences. How have the results been disseminated to communities of interest?See products-Results were submitted to several journals and one thesis dissertation. What do you plan to do during the next reporting period to accomplish the goals?In the next period, we will continue to complete the RNA-Seq analysis of turkeys fed graded levels of Se from Se-deficient to high-Se. In addition we will begin to analyze the low molecular weight Se metabolites in turkeys fed high Se to better understand why turkeys are less susceptible to Se toxicity and to potentially identify biomakers for high Se status.

Impacts
What was accomplished under these goals? There is increasing interest in supplementing animals and humans with selenium (Se) at dietary levels above those that raise selenoproteins to Se-adequate plateau levels. The only quantifiable biomarker for Se toxicity, however, currently appears to be tissue Se, which does not plateau. We targeted the liver because turkey poults fed 5 μg Se/g have hepatic Se concentrations 6-fold above levels in poults fed Se-adequate diet (0.4 μg Se/g as selenite) but without apparent effects on growth or health. To assess the full turkey transcriptome for the effect of Se status from Se-deficient to high-Se, we conducted RNA-Seq analysis on liver mRNA from turkey poults fed 0, 0.025, 0.4, 0.75 and 1.0 μg Se/g diet in experiment 1, and fed 0.4, 2.0 and 5.0 μg Se/g in experiment 2. Our objectives were (1) to identify transcript biomarkers for high Se status, which in turn would (2) suggest proteins and pathways used by animals to adapt to high Se. As reported previously, the major effect of Se-deficiency was to down-regulate expression of a subset of selenoprotein transcripts in liver, with little significant effect on general transcript expression. In response to high Se intake (2 and 5 μg Se/g) relative to Se-adequate turkeys, there were only a limited number of significant differentially expressed transcripts, all with only relatively small fold-changes; no transcript showed a consistent pattern of altered expression in response to high Se intakes across the 1, 2 and 5 μg Se/g treatments, and there were no associated metabolic pathways and biological functions that were significant and consistently found with high Se supplementation. A comparison of differentially expressed transcript sets with high Se transcript sets identified in parallel studies in rats (2 μg Se/g) or in mice (~3 μg Se/g) fed high Se also failed to identify common differentially expressed transcripts between these three species. Gene set enrichment analysis also found no gene sets that were consistently altered by high-Se and supernutritional-Se. Collectively, this study indicates that turkeys do not alter gene expression as a homeostatic mechanism to adapt to high Se. Targeting the nature of metabolites present in liver of turkeys fed high Se has the potential to identify biomarkers for high Se status and to suggest metabolic pathways used by turkeys to adapt to high Se intake. We found that liver Se in poults fed 5 μg Se/g diet as Na2SeO3 increased 6-fold as compared to turkeys fed Se-adequate diet (0.4 μg Se/g), but that this increased Se was not due to increases of Se in selenoproteins. Thus, we have begun to study the nature of the Se species that accumulate in animals fed high Se, using HPLC-ICP-MS and HPLC-ESI-MS/MS in collaborative studies. This research may identify potential biomarkers for high Se status and help to determine upper limits for dietary Se supplementation.

Publications

  • Type: Journal Articles Status: Published Year Published: 2019 Citation: Taylor RM, Bourget VG, Sunde RA. 2019. High dietary inorganic selenium has minimal effects on turkeys and selenium status biomarkers. Poult. Sci. 98: 855-865. PMID: 30239950
  • Type: Theses/Dissertations Status: Accepted Year Published: 2019 Citation: Taylor RM. 2019. Response to high inorganic selenium in hepatic turkey selenoproteome, transcriptome and selenmetabolome. University of Wisconsin-Madison, PhD Dissertation.
  • Type: Conference Papers and Presentations Status: Published Year Published: 2019 Citation: Taylor RM, Sunde RA. 2019. Transcriptomic analysis of selenium-deficient and high-selenium turkey liver. Plant Anim Genom. PE0428. (abs.)
  • Type: Conference Papers and Presentations Status: Published Year Published: 2019 Citation: Taylor RM, Sunde RA. 2019. Full transcriptome expression in liver of selenium-deficient and high-selenium turkeys (Meleagris gallopavo) determined by RNA-seq. ASN P24-025-19: (abs.)
  • Type: Conference Papers and Presentations Status: Published Year Published: 2019 Citation: Taylor RM, Sunde RA. 2019. Selenium requirement of turkeys based on tissue selenium concentration and selenoprotein activity and transcript expression. J Anim Sci. 97: 177-178. (abs.)
  • Type: Conference Papers and Presentations Status: Accepted Year Published: 2019 Citation: Sunde RA, Taylor RM. 2019. The Turkey Selenoproteome: genes and regulation of transcript expression by selenium deficiency and high Se status. Plant Anim Genom. 27: W881. (abs.)