Progress 10/01/19 to 09/30/20
Outputs Target Audience:Fellow scientists, veterinarians, animal and poultry industry professionals. Changes/Problems:
Nothing Reported
What opportunities for training and professional development has the project provided?Train post-doctoral associates and support staff. How have the results been disseminated to communities of interest?Peer reviewed publications, webinars and presentations at scientific meetings and conferences. What do you plan to do during the next reporting period to accomplish the goals?We plan on continuing our studies and screen additional GRAS status compounds and/or their combinations to reduce the environmental persistence and survival of pathogens on poultry carcasses. We plan on completing the meat quality and consumer acceptability of poultry products subjected to the proposed treatments.
Impacts What was accomplished under these goals?
During the past year we continued our on-going research and conducted several experiments testing the efficacy of natural, FDA approved food grade compounds to reduce Campylobacter on poultry products. Our on-going studies includes testing phytochemicals and probiotics for their anti-Campylobacter efficacy targeting three main areas (poultry production, post-harvest contamination, and limiting survival of pathogens in the processing environment) in a multi-hurdle approach from farm to fork. Below are some of the specific studies and their progress during the current reporting period. Study 1: We conducted studies evaluating the efficacy of cell-free supernatents of Lactobacillus and Propionibacterium in reducing the biofilm formation of Campylobacter jejuni. These studies were completed and the manuscript is under preparation. Study 2: We completed a study evaluating the efficacy of in-water supplementation of two generally recognized as safe (GRAS) compounds, eugenol and trans-cinnamaldehyde as nanoemulsion in reducing C. jejuni colonization in broiler chickens. In addition, the effect of eugenol and trans-cinnamaldehyde nanoemulsions on C. jejuni colonization factors and cecal microbiome were also investigated. These studies were completed and the manuscript is under preparation.
Publications
- Type:
Journal Articles
Status:
Published
Year Published:
2019
Citation:
Upadhyaya, I., K. Arsi, A. Fanatico, B. R. Wagle, S. Shrestha, A. Upadhyay, C. N. Coon, M. Schlumbohm, J. Trushenski, C. Owens-Hanning, M. N. Riaz, M. B. Farnell, D. J. Donoghue and A. M. Donoghue. 2019. Bigheaded Carp-based Meal as a Protein Feed in Ecological and Organic Poultry Production. Journal of Applied Poultry Research. 28(4):1131-1142.
- Type:
Journal Articles
Status:
Published
Year Published:
2020
Citation:
Wagle, B. R., D. Marasini, I. Upadhyaya, S. Shrestha, K. Arsi, A.M Donoghue, F. Carbonero, D. J. Donoghue, K. Maas and A. Upadhyay. 2020. Draft Genome sequences of Campylobacter jejuni strains isolated from poultry. Microbiology Resource Announcements. 9:e01272-19. https://doi.org/10.1128/MRA.01272-19.
- Type:
Journal Articles
Status:
Published
Year Published:
2020
Citation:
Wagle, B. R., A. M. Donoghue, S. Shrestha, I. Upadhyaya, K. Arsi, A. Gupta, R. Liyanage, N. C. Rath, D. J. Donoghue and A. Upadhyay. 2020. Carvacrol attenuates Campylobacter jejuni colonization factors and proteome critical for persistence in the chicken gut. Poultry Science. 99(9):4566-4577.
- Type:
Journal Articles
Status:
Published
Year Published:
2020
Citation:
Acharya, M., K. Arsi, A. M. Donoghue, R. Liyanage and N. C. Rath. 2020. Production and the characterization of avian crypt-villus enteroids and the effect of chemicals. BMC Veterinary Research. 16:179. https://doi.org/10.1186/s12917-020-02397-1.
- Type:
Journal Articles
Status:
Published
Year Published:
2020
Citation:
Acharya, M., R. Liyanage, A. Gupta, K. Arsi, A. M. Donoghue, J. O. Lay Jr., and N. C. Rath. 2020. Thymosin B4 dynamics during chicken enteroid development. Molecular and Cellular Biochemistry. https://doi.org/10.1007/s11010-020-04008-x.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Shrestha, S., B. R. Wagle, A. Upadhyay, K. Arsi, D. J. Donoghue and A. M. Donoghue. The efficacy of Carvacrol, a phytochemical derived from oregano oil as an antimicrobial wash for reducing Campylobacter jejuni and aerobic bacteria in postharvest poultry. 2nd International Conference on Energy Applications, Biotechnology, Applied Science and Engineering Research (EBAE 2019). December 11-12, Phuket, Thailand.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Donoghue, A. M., B. R. Wagle, K. Arsi, S. Shrestha and A. Upadhyay. 2019. A multi-hurdle approach using phytochemicals as natural alternatives to antibiotics for controlling Campylobacter in poultry. 3rd International Symposium on Alternatives to Antibiotics (ATA). December 16-18, Bangkok, Thailand.
- Type:
Conference Papers and Presentations
Status:
Other
Year Published:
2020
Citation:
Arsi. K., G. R. Huff, W. E. Huff and A. M. Donoghue. 2020. Application of bacteriophages for prevention and control of pathogens in poultry. Phage Futures Congress. Washington D.C., USA.
- Type:
Conference Papers and Presentations
Status:
Other
Year Published:
2020
Citation:
Arsi, K., and Joshua M. Lyte. 2020. Antibiotic Alternatives for Controlling Foodborne Pathogens in Poultry. USDA ARS AMR/ATA webinar, June 9, 2020.
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Progress 10/01/18 to 09/30/19
Outputs Target Audience:
Nothing Reported
Changes/Problems:
Nothing Reported
What opportunities for training and professional development has the project provided?Train both graduate students and post-doctoral fellows. How have the results been disseminated to communities of interest?Peer reviewed publications and presentations at scientific meetings and conferences. What do you plan to do during the next reporting period to accomplish the goals?Continue utilizing additional natural plant extracts and/or their combinations to reduce the environmental persistence and survival of pathogens on poultry carcasses.
Impacts What was accomplished under these goals?
Substantial progress was made on this project. We have tested numerous phytochemicals for their anti-Campylobacter efficacy targeting three main areas (poultry production, post-harvest contamination, and limiting survival of pathogens in the processing environment) in a multi-hurdle approach from farm to fork. Our results indicate that plant-based, generally recognized as safe status (GRAS) compounds [eg. trans-cinnamaldehyde (obtained from cinnamon bark), eugenol (from clove oil), and carvacrol (from oil of thyme)] are very effective in reducing C. jejuni in the poultry gut, on carcasses as well as inhibiting C. jejuni biofilms on common food processing surfaces. Follow up mechanistic studies (using real-time quantitative PCR and proteomics analysis) revealed that phytochemicals modulate key genes and proteins essential for intestinal colonization, persistence in the environment, and survival of C. jejuni in meat products. Results from these studies are being disseminated to fellow scientists and poultry producers by presentations at national and international scientific and industry meetings and publications in scientific journals.
Publications
- Type:
Journal Articles
Status:
Published
Year Published:
2019
Citation:
Arsi, K., A. M. Donoghue, J. H. Metcalf and D. J. Donoghue. 2019. Effect of Dietary Supplementation of Essential Oils, Eugenol or Trans-cinnamaldehyde, on Enteric Colonization of Campylobacter in Broiler Chickens. International Journal of Advances in Science, Engineering and Technology (IJASEAT). 7(1), Spl. Iss-2:30-32.
- Type:
Journal Articles
Status:
Published
Year Published:
2019
Citation:
Wagle, B. R., A. Upadhyay, S. Shrestha, S., K. Arsi, I. Upadhyaya, A. M. Donoghue and D. J. Donoghue. 2019. Pectin or chitosan coating fortified with eugenol reduces Campylobacter jejuni on chicken wingettes and modulates expression of critical survival genes. Poultry science. 98(3):1461-1471
- Type:
Journal Articles
Status:
Published
Year Published:
2019
Citation:
Shrestha, S., B. R. Wagle, A. Upadhyay, K. Arsi, I. Upadhyaya, D. J. Donoghue and A. M. Donoghue. 2019. Edible coatings fortified with carvacrol reduce Campylobacter jejuni on chicken wingettes and modulate expression of select virulence genes. Frontiers in Microbiology. 10:583
- Type:
Journal Articles
Status:
Published
Year Published:
2019
Citation:
Wagle, B. R., A. Upadhyay, I. Upadhyaya, S. Shrestha, K. Arsi, K. Venkitanarayanan, A. M. Donoghue, and D. J. Donoghue. 2019. Trans-cinnamaldehyde, eugenol and carvacrol reduce Campylobacter jejuni biofilms and modulate expression of select genes and proteins. Frontiers in Microbiology. 10:1837.
- Type:
Journal Articles
Status:
Published
Year Published:
2019
Citation:
Wagle, B. R., K. Arsi, S. Shrestha, A. Upadhyay, I. Upadhyaya, K. Bhargava, A. M. Donoghue and D. J. Donoghue. 2019. Eugenol as an antimicrobial dip treatment reduces Campylobacter jejuni in postharvest poultry. Journal of Food Safety. 39(6):e12704.
- Type:
Journal Articles
Status:
Published
Year Published:
2019
Citation:
Shrestha, S., B. R. Wagle, A. Upadhyay, K. Arsi, I. Upadhyaya, D. J. Donoghue and A. M. Donoghue. 2019. Carvacrol antimicrobial wash treatments reduce Campylobacter jejuni and aerobic bacteria on broiler chicken skin. Poultry Science Journal. 98(9):4073-4083
- Type:
Book Chapters
Status:
Published
Year Published:
2019
Citation:
Upadhyay, A., K. Arsi, I. Upadhyaya, A. M. Donoghue, and D. J. Donoghue. 2019. Natural and Environmentally Friendly Strategies for Controlling Campylobacter jejuni colonization in poultry, survival in poultry products and infection in humans. In: Food Safety in Poultry Meat Production, pp. 67-93. Springer, Cham.
- Type:
Book Chapters
Status:
Published
Year Published:
2019
Citation:
Arsi, K., D. J. Donoghue, K. Venkitanarayanan, and A. M. Donoghue. 2019. Reducing Foodborne Pathogens in Organic Poultry: Challenges and Opportunities. In: Food Safety in Poultry Meat Production, pp. 25-46. Springer, Cham.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Wagle, B. R., A. Upadhyay, I. Upadhyaya, K. Arsi, S. Shrestha, R. Liyanage, D. J. Donoghue and A. M. Donoghue. 2019. Plant-derived antimicrobials reduce biofilm formation and inactivates mature biofilms of Campylobacter jejuni. International Conference on Dynamics of Engineering Technology Applied Science and Networking. January 7-8, Phuket, Thailand.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Wagle, B. R., A. Upadhyay, I. Upadhyaya, K. Arsi, S. Shrestha, R. Liyanage, D. J. Donoghue and A. M. Donoghue. 2019. Plant-derived antimicrobials modulate Campylobacter jejuni proteome essential for biofilm formation. International Plant & Animal Genome XXVII, January 12-16, 2019, San Diego, USA.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Arsi, K., A. M. Donoghue and D. J. Donoghue. 2019. Invasive Asian Carp Fish species, a Natural and Sustainable Source of Methionine for Organic Poultry Production. 21st International Conference on Poultry Diseases and Nutritional Strategies (ICPDNS 2019). January 17-18, Bangkok, Thailand.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Shrestha, S., A. M. Donoghue, K. Arsi, B. R. Wagle, A. Upadhyay, D. J. Donoghue. 2019. Efficacy of Carvacrol as an Antimicrobial Wash Treatment for Reducing both Campylobacter jejuni and Aerobic Bacterial Counts on Chicken Skin. International Conference on Sustainable Food Safety, Quality and Management System in Food Science (ICSFSQMSFS 2019). February 14-15, London, United Kingdom.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Wagle, B. R., S. Shrestha, K. Arsi, D. Marasini, I. Upadhyaya, A. Upadhyay, D. J. Donoghue and A. M. Donoghue. 2019. Effect of eugenol and trans-cinnamaldehyde on Campylobacter jejuni cecal colonization, proteome and gut microbiome profile in broiler chickens. American Society for Microbiology (ASM) Microbe 2019. Jun 20 - 24, San Francisco, California.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Donoghue, A. M., B. R. Wagle, K. Arsi, A. Upadhyay, S. Shrestha, and R. Liyanage. 2019. Phytochemicals reduce Campylobacter jejuni biofilms on common food contact surfaces. 20th Campylobacter, Helicobacter and Related Microorganisms conference (CHRO 2019). September 8-11, Belfast, Northern Ireland, UK.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Shrestha, S., B. R. Wagle, A. Upadhyay, K. Arsi, D. J. Donoghue and A. M. Donoghue. The efficacy of Carvacrol, a phytochemical derived from oregano oil as an antimicrobial wash for reducing Campylobacter jejuni and aerobic bacteria in postharvest poultry. 2nd International Conference on Energy Applications, Biotechnology, Applied Science and Engineering Research (EBAE 2019). December 11-12, Phuket, Thailand.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2019
Citation:
Donoghue, A. M., B. R. Wagle, K. Arsi, S. Shrestha and A. Upadhyay. 2019. A multi-hurdle approach using phytochemicals as natural alternatives to antibiotics for controlling Campylobacter in poultry. 3rd International Symposium on Alternatives to Antibiotics (ATA). December 16-18, Bangkok, Thailand.
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Progress 10/03/17 to 09/30/18
Outputs Target Audience:Fellow scientists, veterinarians, animal and poultry industry professionals. Changes/Problems:
Nothing Reported
What opportunities for training and professional development has the project provided?Train both graduate students and post-doctoral fellows. How have the results been disseminated to communities of interest?Peer reviewed publications and presentations at scientific meetings and conferences. What do you plan to do during the next reporting period to accomplish the goals?Continue utilizing additional natural plant extracts as post-harvest washes to try and further reduce Campylobacter counts on poultry carcasses and ensure there is consumer acceptance of the treated product.
Impacts What was accomplished under these goals?
Substantial progress was made on this project. Various combinations of natural plant extracts were tested on poultry carcasses and produced a greater than 2 log reduction in Campylobacter counts. Furthermore, sensory panel testing of treated products determined there was no adverse effect on consumer acceptance. Results from these studies are being disseminated to fellow scientists and poultry producers by presentations at national and international scientific and industry meetings and publication in scientific journals.
Publications
- Type:
Journal Articles
Status:
Published
Year Published:
2018
Citation:
Woo-Ming, A., K. Arsi, J. R. Moyle, H. R. Arambel, P. J. Blore, V.B. Gaunsalis, C.M. Owens, F. D. Clark, A. Fanatico, D. J. Donoghue, and A. M. Donoghue. 2018. Growth performance of fast-growing broilers reared under different types of pasture management: Implications for organic and alternative production systems - Part II. Journal of Applied Poultry Research. 27(2):215-222.
Woo-Ming, A., K. Arsi, B. R. Wagle, S. Shrestha, A. M. Donoghue, and D. J. Donoghue. 2018. Probiotic Cultures of Lactobacillus Spp. Isolates Reduce the Foodborne Pathogen, Campylobacter jejuni on Post-Harvest Chicken. International Journal of Advances in Science Engineering and Technology. 6(2):40-44.
Fanatico, A. C., K. Arsi, I. Upadhyaya, J. Morales Ramos, D. Donoghue, and A. M. Donoghue. 2018. Sustainable Fish and Invertebrate Meals for Methionine and Protein Feeds in Organic Poultry Production, Journal of Applied Poultry Research. 27(4):437-448.
Wagle, B. R., A. Upadhyay, S. Shrestha, S., K. Arsi, I. Upadhyaya, A. M. Donoghue and D. J. Donoghue. 2018. Pectin or chitosan coating fortified with eugenol reduces Campylobacter jejuni on chicken wingettes and modulates expression of critical survival genes. Poultry science. https://doi.org/10.3382/ps/pey505.
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