Source: PHYLLOTECH, LLC submitted to
ENZYMATIC DEGRADATION OF QUORUM-SENSING SIGNALS TO DECREASE BACTERIAL PHYTOPATHOGENICITY
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
TERMINATED
Funding Source
Reporting Frequency
Annual
Accession No.
1006721
Grant No.
2015-33610-23784
Project No.
WISK-2015-03346
Proposal No.
2015-03346
Multistate No.
(N/A)
Program Code
8.2
Project Start Date
Sep 1, 2015
Project End Date
Aug 31, 2018
Grant Year
2015
Project Director
Shepherd, R. W.
Recipient Organization
PHYLLOTECH, LLC
505 S ROSA RD STE 102
MADISON,WI 537191262
Performing Department
(N/A)
Non Technical Summary
Quorum sensing (QS) allows bacterial populations to coordinate gene expression in a cell density dependent manner and plays a significant role in the onset of pathogenesis and biofilm development. In many Gram-negative bacteria, QS is mediated by signaling molecules called N-acyl-homoserine lactones (AHLs). We recently identified an AHL acylase from P. syringae which can enzymatically degrade and inactivate the AHLs used by phytopathogens. Similarly, during the Phase I project, we discovered a new AHL acylase from a closely-related pseudomonad. Our technological innovation is the use of these AHL acylases to degrade the AHL signals of bacterial phytopathogens and reduce plant disease. Our research objectives for the Phase II project will be to continue to advance our technologies by evaluating their efficacy in field trials. We will increase the production scale of heterologous protein and then evaluate formulations of exogenous acylase. We will also further develop our biocontrol strains and plants that constitutively produce AHL acylases. QS is a nonessential cellular process and so, unlike existing antibiotics that target indispensible functions, the targeted degradation of QS signals will exert significantly reduced selective pressure on plant pathogens and slow resistance development. The enzymatic degradation of QS signals will be environmentally friendly and will be advantageous over existing disease management strategies.
Animal Health Component
0%
Research Effort Categories
Basic
0%
Applied
100%
Developmental
0%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
21524101100100%
Goals / Objectives
Our main goal of this project is to continue the development of an enzymatic method to disrupt the intercellular communication of bacterial plant pathogens and reduce disease. Our objectives will include:1. Increase the production scale of the enzymes in both a bacterial system and a plant system, and evaluate formulations of the exogenous enzymes in on-plant disease assays.2. Conduct field trials to evaluate the efficacies of the exogenous enzymes and biocontrol strains against bacterial pathogens.3. Develop the enzymes as genetic traits for numerous crops.
Project Methods
Standard methodologies for molecular biology, biochemistry, and bacterial and plant transformation will be utilized to continue the generation of plant lines and bacterial strains that produce signal-degrading enzymes. Bioreporter-based assays will be used to test enzyme activity. Standard disease assays and field trials will be conducted to determine the efficacies of enzyme-based pathogen control strategies.

Progress 09/01/15 to 08/31/18

Outputs
Target Audience:The primary target for the products developed during the project period arecustomers who wish to purchase and utilize an environmentally-friendly product to control diseases caused by bacterial phytopathogens. Such customers could include farmers, greenhouse producers, academic researchers, and private gardeners. Furthermore, with both data demonstratingefficacy and a production system for large-scale implementation, the technology is available for licensing by large industrial partners wishing to expand their product portfolio. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided? Nothing Reported How have the results been disseminated to communities of interest?The company's management team has pitched the company and its technology to numerous large companies and investment groups. What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? With this SBIR Phase II project, PhylloTech has developed an enzyme-based biochemical pesticide that can be utilized to control gram-negative bacterial diseases of potato, tomato, and other crop plants. A main objective was the development of a large-scale production system for the active ingredients, and this was successfully accomplished through the use of a scalable bacterial expression system and the implementation of specific fusion tags that allow easy target harvest. Furthermore, material generated with the large-scale production system was demonstrated to have significant efficacy as a formulated topical spray in both disease assays in the laboratory and small-scale field trials at a private farm. A full patent application and an additional provisional application have been filed to protect the technology, and the company is pursuing strategic partnerships for downstream development.

Publications


    Progress 09/01/16 to 08/31/17

    Outputs
    Target Audience:The primary target for this research is customers who wish to purchase and utilize an environmentally-friendly product to control diseases caused by bacterial phytopathogens. Customersinclude farmers, greenhouse producers, researchers, andlarge industrial partners wishing to expand their product portfolio. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided? Nothing Reported How have the results been disseminated to communities of interest?Ryan Shepherd, PhylloTech's CEO, has pitched the company and its technology to numerous large companies and investment groups. What do you plan to do during the next reporting period to accomplish the goals?Our main research goals for the next 12 months are to continue laboratory and field trials with AHL acylases generated with our optimized production systems, and also provide material tostrategic partners for independent testing.

    Impacts
    What was accomplished under these goals? PhylloTech has continued to move forward on the technical objectives in the second year of the project. We have performed further testing of the use of two AHL acylases to inhibit gram-negative bacterial pathogens. Additionally, we have developed new production systems and protocols for both enzymes thatallow us to generate significant quantities of active ingredient. We have also filed a full application for a patent that will protect the technology, and wecontinue efforts to have AHL acylases registered as biochemical pesticides.

    Publications


      Progress 09/01/15 to 08/31/16

      Outputs
      Target Audience:The primary target for this research is customers who wish to purchase and utilize an environmentally-friendly product to control diseases caused by bacterial phytopathogens. Customers will include farmers, greenhouse producers, researchers, or large industrial partners wishing to expand their product portfolio. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided? Nothing Reported How have the results been disseminated to communities of interest?Ryan Shepherd, PhylloTech's CEO, has pitched the company and its technology at both the InvestMidwest Venture Capital Forum (St. Louis, MO; March 2016) and the Ag Innovation Showcase (St. Louis, MO; September 2016). What do you plan to do during the next reporting period to accomplish the goals?Our main research goals for the next 12 months are to generate enough AHL acylases for the EPA registration process, as well as provide AHL acylases to large strategic partners for independent testing. Additionally, we will perform field trials with exogenous enzymes in various formulations to demonstrate further product efficacy.

      Impacts
      What was accomplished under these goals? PhylloTech has made significant progress on the technical objectives in the first year of the project. We have performed further laboratory testing of the use of AHL acylases to inhibit a number of gram-negative bacterial pathogens. Additionally, we have performed a first round of field testing with exogenous AHL acylase at a private farm in Brooklyn, Wisconsin. Our attempts to produce AHL acylase in plants are ongoing, and we believe that the strong efficacy data describing the use of exogenous enzyme indicate that the best strategy for product development will be as a topical spray. We are also pursuing numerous strategies to increase our production capacity from the native host. We have also initiated efforts to have AHL acylases registered as biochemical biopesticides by the EPA.

      Publications