Progress 05/01/15 to 09/30/17
Outputs Target Audience: The research in the McFrederick laboratory targets both agriculutral and general public stakeholders. On the agricultural side, I conducted research for the Almond Board of California, the National Honey Board, Project ApisM,and the Western Alfalfa Seed Grower's Association. I also presentedat the Almond Board of California'sand the Western Alfalfa Seed Grower's Association's annual meetings. I gave talks at CAPCA meetings (3) and various other public outlets such as beekeeper's associations and Botanic Gardens. Finally, we conducted outreach for elementary schools and the general public. For example, we staffeda booth at the annual Riversie Insect Fair (3 yaers), which drew about 14,000 visitors in 2017. Changes/Problems:
Nothing Reported
What opportunities for training and professional development has the project provided?Nine undergraduate students from diverse backgrounds were trained in microbiology, experimentation, molecular biology, and bee biology. One of these undergrads won a research award, presented her results at a campus-wide research symposium, and was accepted to a Ph.D. program. Four graduate students were trained in microbiology, experimentation, molecular biology, bioinformatics, and bee biology. One student received research fellowships from NASA and the USDA, as well as published the first graduate student-led paper from the lab. One postdoc was trained in microbiology, experimentation, molecular biology, bioinformatics, and bee biology. The postdoc published one paper and recently received a prestigious fellowship in the UK. How have the results been disseminated to communities of interest?I presented at the Almond Board of California's and the Western Alfalfa Seed Grower's Association's annual meetings anually for all three years of the project. I gave talks at CAPCA meetings (3) and various other public outlets such as beekeeper's associations and Botanic Gardens. Finally, we conducted outreach for elementary schools and the general public. For example, we staffed a booth at the annual Riversie Insect Fair (3 yaers), which drew about 14,000 visitors in 2017. I also gave 2 interviews for the local newspaper (the Press Enterprise), maintained my lab's website, and fielded numerous phone calls and questions. Finally, we have been maintaining our productive publication record. What do you plan to do during the next reporting period to accomplish the goals?
Nothing Reported
Impacts What was accomplished under these goals?
(A) The role of Lactobacillus kunkeei in alfalfa leafcutter bee nutrition In 2016 we conducted two experiments with ALCBs. First, we used 16S rRNA gene sequencing to investigate the microbiome of parasites and parasitoids of ALCBs. Next, we measured protein content and fat content of ALCB larvae, while also sequencing microbes in the guts of these same larvae. We looked for correlations between the nutritional parameters and specific microbes, but were surprised to find none. In 2017, we tested the inhibitory ability of lactobacilli on fungal bee pathogen and saprohytic fungi found in bee pollen provisions. We used inhibition assays with 30 strains of Lactobacillus and 13 fungal isolates. We discovered that all fungal strains could be inhibited by one or more bacterial strains, but no one bacteria could inhibit all fungi. Fungal cocktails are therefore important for protecting bee pollen provisions from saprophytic fungi, and bee larvae from fungal pathogens. (B) The influence of cover crop forage on honey bee nutrition and gut microbes, and on colony growth and activity In 2016, we conducted a large scale experiment with Mark Carrol and William Meikle of the Carl Hayden Bee Research center. We found that honey bee colonies that were given forage survived much better than those denied forage fopr several weeks in the winter. Interestingly, the forage treatment had little effect on the gut microbiome, but larrge effects on bee health. This work has now been published by my graduate student Jason Rothman. In 2017, we continued this work in collaboration with Elina Nino and Neal Williams of UC Davis and Kirk Anderson of the Carl Hayden Bee Research Center. We are investigating the effect of supplemental forage on pathogen load and honey bee immune function. We are still processing samples in the lab for this project. (C) The probiotic potential of Lactobacillus kunkeei for honey production We finished this experiment in 2016. We found that one strain did not affect honey bee survival while a seperate strain negatively affected survival. When developing probiotics, strain identity is therefore extremely important. We have recently sequenced the genomes of these two strains, and are hoping to identify differences that may explain the different phenotypes.
Publications
- Type:
Journal Articles
Status:
Published
Year Published:
2017
Citation:
Marcus J Pennington, Jason A Rothman, Michael B Jones, Quinn S McFrederick, Jay Gan, John T Trumble. Effects of contaminants of emerging concern on Megaselia scalaris (Lowe, Diptera: Phoridae) and its microbial community. Scientific Reports 7(1) 8165
- Type:
Journal Articles
Status:
Published
Year Published:
2017
Citation:
MJ Pennington, JA Rothman, SL Dudley, MB Jones, QS McFrederick, Jay Gan, John T Trumble. Contaminants of emerging concern affect Trichoplusia ni growth and development on artificial diets and a key host plant Proceedings of the National Academy of Sciences 114 (46), E9923-E9931
- Type:
Journal Articles
Status:
Published
Year Published:
2018
Citation:
Longitudinal Effects of Supplemental Forage on the Honey Bee (Apis mellifera) Microbiota and Inter-and Intra-Colony Variability JA Rothman, MJ Carroll, WG Meikle, KE Anderson, QS McFrederick Microbial ecology, 1-11
- Type:
Journal Articles
Status:
Published
Year Published:
2018
Citation:
Effects of contaminants of emerging concern on Myzus persicae (Sulzer, Hemiptera: Aphididae) biology and on their host plant, Capsicum annuum
MJ Pennington, JA Rothman, MB Jones, QS McFrederick, J Gan, John T. Trumble
Environmental monitoring and assessment 190 (3), 125
- Type:
Journal Articles
Status:
Published
Year Published:
2017
Citation:
P Graystock, SM Rehan, QS McFrederick. 2017. Hunting for healthy microbiomes: determining the core microbiomes of Ceratina, Megalopta, and Apis bees and how they associate with microbes in bee collected pollen.
Conservation Genetics 18 (3), 701-711
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Progress 10/01/15 to 09/30/16
Outputs Target Audience:The research in the McFrederick laboratory targets both agriculutural and general public stakeholders. On the agricultural side, I condiuct research for the Almond Board of California and the Western Alfalfa Seed Grower's Association. I also present at both opf these association's annual meetings. We also had resewarch projects sponsored by the Honey Board and Project ApisM. I give talks at CAPCA meetings and various other public outlets. Finally, we conduct outreachforelementary schools and the general public. For example, we man a booth at the annual Riversie Insect Fair, which drew about 10,000 visitors in 2016. Changes/Problems:
Nothing Reported
What opportunities for training and professional development has the project provided?Three graduate students, seven undergrads, and one postdoc were trained on experimentation, field work, molecular biology, microbiology, and bioinformatics. How have the results been disseminated to communities of interest?We presented goal A to the Alfalfa Seed Grower's Association annual winter seed meeting. We presented Goal B at the Almond Conference, and we submitted a reprt of goal C to the Honey Board. What do you plan to do during the next reporting period to accomplish the goals?We will continue with the bioinformatic postions of Goal C, an extension of Goal B looking at immune system function, and an extension of goal A using meta-transcriptromics and microbiol;ogical assays.
Impacts What was accomplished under these goals?
(A) The role ofLactobacillus kunkeeiin alfalfa leafcutter bee nutrition In 2016 we conducted two experiments with ALCBs. First, we used 16S rRNA gene sequencing to investigate the microbiome of parasites and parasitoids of ALCBs. Next, we measured protein content and fat content of ALCB larvae, while also sequencing microbes in the guts of these same larvae. We looked for correlations between the nutritional parameters and specific microbes, but were surprised to find none. (B)The influence of cover crop forage on honey bee nutrition and gut microbes, and on colony growth and activity In 2016, we conducted a large scale experiment with Mark Carrol and William Meikle of the Carl Hayden Bee Research center. We found that honey bee colonies that were given forage survived much better than those denied forage fopr several weeks in the winter. Interestingly, the forage treatment had little effect on the gut microbiome, but larrge effects on bee health. (C)The probiotic potential ofLactobacillus kunkeeifor honey production We finished this experiment in 2016. We found that one strain did not affect honey bee survival while a seperate strain negatively affected survival. When developing probiotics, strain identity is therefore extremely important. We have recent;y sequenced the genomes of these two strains, and are hoping to identify differences that may explain the different phenotypes.
Publications
- Type:
Journal Articles
Status:
Accepted
Year Published:
2017
Citation:
Meirelles, L., McFrederick, Q.S., Rodrigues, A., Mantovani, J.D., de Melo Rodovalho, C., Ferreira, H., Bacci, M., Mueller, U.G. Bacterial microbiomes from vertically?transmitted fungal inocula of the leaf?cutting ant Atta texana. Environmental Microbiology Reports. (Accepted 03/26/2016. 11 galley pages.) (Refereed, Electronic) doi: 10.1111/1758-2229.12415.
- Type:
Journal Articles
Status:
Accepted
Year Published:
2017
Citation:
McFrederick, Q.S., Thomas, J.M., Neff, J.L., Russell, K.A., Vuong, H.Q., Hale, A.R., Mueller, U.G. Flowers and wild megachilid bees share microbes. Microbial Ecology [IF 3.232]. (Accepted 09/15/2016. 13 galley pages.) (Refereed, Electronic) doi: 10.1007/s00248-016-0838-1.
- Type:
Journal Articles
Status:
Accepted
Year Published:
2016
Citation:
Gordon, E.RL., McFrederick, Q.S., Weirauch, C. Phylogenetic evidence for ancient and persistent environmental symbiont reacquisition in Largidae (Hemiptera: Heteroptera). Applied and Environmental Microbiology [IF 3.668]. (Accepted 09/27/2016. 34 manuscript pages. 0 galley pages.)
- Type:
Journal Articles
Status:
Published
Year Published:
2016
Citation:
Graystock, P., Blaine, E.J., McFrederick, Q.S., Goulson , D., Hughes, W.O. 2016. Do managed bees drive parasite spread and emergence in wild bees? . International Journal for Parasitology: Parasites and Wildlife. Vol. 5: p.64-75. (Refereed, Electronic) doi: 10.1016/j.ijppaw.2015.10.001.
- Type:
Journal Articles
Status:
Published
Year Published:
2016
Citation:
Engel, P., Kwong, W.K., McFrederick, Q.S., Anderson, K.E., Barribeau, S., Chandler, J.A., Cornman, R.S., Dainat, J., de Miranda, J., Doublet, V., Emery, O., Evans, J.D., Farinelli, L., Flenniken, M., Granberg, F., Grasis, J., Gauthier, L., Hayer, J., Koch, H., Kocher, S., Martinson, V., Moran, N., Munoz-Torres, M., Newton, I., Paxton, R., Powell, E., Sadd, B., Schmid-Hempel, P., Schmid-Hempel, R., Song, S., Schwarz, R., vanEngelsdorp, D., Dainat, B. 2016. The Bee Microbiome: Impact on Bee Health and Model for Evolution and Ecology of Host-Microbe Interactions. MBio [IF 6.650]. Vol. 7: 2 p.e02164-15
- Type:
Journal Articles
Status:
Published
Year Published:
2016
Citation:
McFrederick, Q.S., Rehan, S. 2016. Characterization of pollen and bacterial community composition in brood provisions of a small carpenter bee . Molecular Ecology [IF 5.947]. Vol. 25: p.2302-2311. (Refereed, Electronic) doi: 10.1111/mec.13608.
- Type:
Journal Articles
Status:
Published
Year Published:
2016
Citation:
De Palma, A., Abrahamczyk, S., Aizen, M., Albrecth, M., Basset, Y., Bates, A., Blake, R., Boutin, C., Bugter, R., Connop, S., Cruz-Lopez, L., Cunningham, S., Darvill, B., Diekotter, T., Dorn, S., Downing, N., Entling, M., Farwing, N., Felicioli, A., Fonte, S., Fowler, R., Franzen, M., Goulson , D., Grass, I., Hanley, M., Hendrix, S., Herrmann, F., Herzog, F., Holzschuh, A., Jauker, B., Kessler, M., Knight, M.E., Kruess, A., Lavelle, P., Le Feon, V., Lentini, P., Malone, L., Marshall, J., Martinez Pachon, E., McFrederick, Q.S., Morales, C., Murdi-Stojnic, S., Nates-Parra, G., Nilsson, S., Ockinger, E., Osgathorpe, L., Parra-H, A., Peres, C., Persson, A., Petanidou, T., Poveda, K., Power, E., Quaranta, M., Quintero, C., Rader, R., Richards, M., Roulston, T.H., Rousseau, L., Sadler, J., Samnegard, U., Schellhorn, N., Schuepp, C., Schweiger, O., Smith-Pardo, A., Steffan-Dewenter, I., Stout, J., Tonietto, R., Tscharntke, T., Tylianakis, J., Verboven, H., Vergara, C., Verhulst, J., Westphal, C., JooYoon, H., Purvis, A. 2016. Predicting bee community responses to land-use changes: Effects of geographic and taxonomic biases . Scientific Reports [IF 5.228]. Vol. 6: p.31153. (Refereed, Electronic) doi: 10.1038/srep31153.
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