Source: TENSIVE CONTROLS, INC. submitted to
DEVELOPMENT OF ANTI-MICROBIAL PEPTIDE THERAPEUTICS
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
TERMINATED
Funding Source
Reporting Frequency
Annual
Accession No.
1003004
Grant No.
2014-33610-21905
Project No.
MO.W-2014-00514
Proposal No.
2014-00514
Multistate No.
(N/A)
Program Code
8.3
Project Start Date
Jun 1, 2014
Project End Date
Jul 31, 2015
Grant Year
2014
Project Director
Gruber, K. A.
Recipient Organization
TENSIVE CONTROLS, INC.
1601 S PROVIDENCE RD
COLUMBIA,MO 652110001
Performing Department
(N/A)
Non Technical Summary
A safe food supply is critical to the well being of any society. However, in highly urbanized societies, the number of people affected by a contaminated food source can be huge. Antibiotic resistant disease in the U.S. is an escalating problem [2, 3]. Much of this problem is a result of the use of antibiotics in production animals, where they prevent disease. Chronic use results in the emergence of organisms resistant to the antibiotics. This project addresses this problem through the development of a new class of antimicrobials, based on totally different mechanisms of action than antibiotics.The rapid emergence of antibiotic-resistant strains of bacteria poses a threat to humans and other animals. This is particularly true in production animals that are housed in close quarters, where infections are easily spread. Antibiotics are not naturally found in animals, but rather are typically products of bacteria themselves, secreted to prevent the growth of other microorganisms. A potential solution to this problem of antibiotic resistance has attracted considerable interest: developing antimicrobials based on mammalian innate immunity peptides and proteins. Innate or non-specific immune response to infection is coded within the genome of plants and animals. In its most simple form it involves the rapid production of peptides and/or proteins (e.g. host defense molecules) that use multiple contact/penetration and intracellular mechanisms to rapidly destroy invading organisms.The Specific Aims of this project are to design antimicrobials based on the mammalian innate immunity class of peptides. Peptides are small molecules that are used for many purposes in the body of humans and other animals. While peptides are not typically used as drugs, due to their lack of oral activity and short duration of action, we have solved these problems. Through the use of new peptide design techniques we have made peptides that act as drugs; possessing oral activity with an extended duration of action. We are proposing to make one or more peptide antimicrobials to address different types of bacterial infections.In addition, many peptides classes show structural similarities, suggesting a common evolutionary origin. Innate immunity peptides have similar features to a class of peptides that regulate feeding and weight gain. We believe it will be possible to produce antimicrobial peptides that also have the ability to stimulate food intake, weight gain, and produce an overall more efficient utilization of feed. These would be highly desirable features for the food animal industry.
Animal Health Component
100%
Research Effort Categories
Basic
(N/A)
Applied
(N/A)
Developmental
100%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
31152301020100%
Knowledge Area
311 - Animal Diseases;

Subject Of Investigation
5230 - Feed and feed additives;

Field Of Science
1020 - Physiology;
Goals / Objectives
A safe food supply is critical to the well being of any society. However, antibiotic resistance is rapidly expanding through many species of bacteria. A recent CDC report highlights the problem of antibiotic-resistant bacteria contamination of retail meat. Further, there is a paucity of recent FDA antibiotic approvals, and a lack of candidate antibiotics in the FDA "pipeline." A potential solution is anti-microbial peptide (AMP) drugs. AMPs are part of the innate immune system of both plants and animals. However, AMPs, like other peptides, have a short half-life and lack oral activity. Many AMPs bear a striking structural similarity to the melanocortin family of appetite/metabolism regulating peptides. Evidence indicates that melanocortins appeared early in invertebrate evolution, in immune response tissues. Despite the link between melanocortins and AMPs, the technical approaches for enhancing melanocortin structure-function remain unexploited by the AMP field. We have patented technology for suppressing side effects in melanocortin/AMP peptides, and a patent-pending platform technology for making these peptides "drugable:" orally active with extended half-life. We propose to make an AMP therapeutic peptide that incorporates a melanocortin antagonist pharmacophore, producing an orally active antimicrobial that stimulates food intake and weight gain in production animals. Further, since our drug is a peptide, its breakdown products will be substances already found in the body (amino acids). This may eliminate the 28 day holding period between the last dose of a drug and the harvesting of a production animal. AMPs could be ideal therapeutics to replace antibiotics in both animals and humans.
Project Methods
The goals of this project are to use established modifications to known cationic-aromatic peptide structures to enhance antimicrobial activity, while incorporating structural features that produce an enhancement of feeding and weight gain. Our company acquired SBIR Phase II funding from the National Cancer Institute due to our delineation of unique structure : function relationships in melanocortin peptides, and our proven ability to produce orally active melanocortin peptide therapeutic agents against cancer-induced cachexia. This knowledge is directly applicable to cationic-aromatic antimicrobial peptide (AMP) drug development. For example, we have patent-pending technology to make these peptides orally active, with extended in vivo ½ lives (hours, not minutes). We are prepared to use these approaches, as well as other recently patented technologies, to produce AMP therapeutics to address the need for replacements for antibiotics animal husbandry.The AMP class includes a wide variety of members. The AMPs that appear most amenable as a template for therapeutic drug development are the cationic-aromatic class, due to their relatively small size. Further, these AMPs have structural similarities to the melanocortin MC) family of appetite and weight regulating peptides. The literature is replete with different approaches to make MCs into more drug-like molecules, including patented and patent-pending technologies from our company. While these approaches were originally designed to regulate the appetite and metabolic effects of synthetic MC ligands, they are directly applicable to AMPs. Further, several of the peptide chemistry approaches successfully applied to MCs (e.g. cyclization, substitution of Nal for aromatic residues have been individually shown to be efficacious in AMPs. However, no one has yet made the leap of combining these and other derivatizations strategies found in synthetic MC ligands, into a single AMP.Using both high through put assays to assess antimicrobial activity, and in vivo assays to measure stimulation of food intake, we will screen a peptide library of structures that are hybrids of MCs and antimicrobial peptides. The goal of this will be to identify structural features mediating antimicrobial activity in the setting of a MC ligand.

Progress 06/01/14 to 07/31/15

Outputs
Target Audience:The University of Missouri College of Business Administration has a MBA course in Entrepreneurship. As part of the course,a student group was assigned to do a business planfor the production animal markety of the antimicrobial and weight enhancing peptidesdeveloped in this SBIR Phase I grant. The students are actually contacting and interviewing various organizations/companies involved in the steer, pig, and poultry industries. As part of their questions aboput the market need for our potential pharmaceuticval products,our target audiences are learning about our company and its products. as part of their Changes/Problems:As noted on a previous page, the FDA has a new position on approval of antimicrobials for enhancing weight gain in production animals; such drugs will not be approved. Thus, we need to develop separate drugs for antimicrobial actions and for enhanced feed efficiency/weight gain. What opportunities for training and professional development has the project provided?We had both an undergraduate and a veterinary student working on our SBIR Phase I project. How have the results been disseminated to communities of interest? Nothing Reported What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? While we initially were planning to develop a peptide drug that combined antimicrobial and weight enhancing activities, recent position statements from the FDA caused a change in our business plan. FDA decided to not allow the approval/sale of antimicrobials for weight -enhancing actions in production animals, due to the possibility of the development of microbial resistance. While we can provide theoretical functional arguements against this concept, our development workon ahuman antimicrobial for hospital-associated infections (there is significant DOD interest in our work) will provide FDA with further support for their position. Thus, we decided to develop separate therapeutics for each problem, with separate business plans.

Publications


    Progress 06/01/14 to 05/31/15

    Outputs
    Target Audience: Nothing Reported Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided? Nothing Reported How have the results been disseminated to communities of interest? Nothing Reported What do you plan to do during the next reporting period to accomplish the goals? Completion of project goals.

    Impacts
    What was accomplished under these goals? Development of Anti-Microbial Peptides (AMPs) We identified anti-microbial activity in several analogs of our melanocortin antagonist therapeutic (TCMCB07, Fig 1 below), by testing their effects on both Gram positive and Gram negative microbes (Table 1, below). These AMPs had cationic residue additions, and substitutions of aromatic residues with naphthylalanine (Nal; a synthetic tryptophan analog), since both of these derivatizations enhance antimicrobial activity (33). Our first 5 most effective AMP peptides caused substantial cell agglutination effects, and 4 of these have additional effects on cell division processes, inhibition of division. The ability of an AMP to cause agglutination of bacterial cells is a beneficial attribute, as this could lead to increased phagocytosis and clearance of bacteria by macrophages and neutrophils (34). Several previously unreported aspects of AMPs are seen in the tables below. The C-terminal dipeptide sequence (Table 1, Val-Pro vs. Val-Phe or Phe-Val) appears to direct relative antimicrobial activity towards Gram-negative or Gram-positive species. Another aspect of antimicrobial peptides is seen in the two control peptides in Table 1; melittin and Mas7. Both are cationic-nonpolar proteins, similar to AMPs. Melittin is an antimicrobial peptide derived from bee venom, while Mas7 is a structural analogue of mastoparan and a known activator of cell membrane heterotrimeric Gi-proteins and its downstream effectors. Both showed significant differential antimicrobial activity; significantly better towards Gram-negative organisms. Fig. 1: TCMCB07; Orally active melanocortin 4 receptor antagonist Ac-Nle-c[Asp-Pro-d-Nal(2′)-Arg-Trp-Lys]-d-Val-d-Pro-NH2 Development of an AMP with Anti-Biofilm Activity We designed a hybrid anti-biofilm-antimicrobial peptide drug (AB01; Fig 2, below), using our platform technology, that incorporates a potential melanocortin receptor antagonist sequence. The C-terminal di-peptide sequence of AB01 (dVal-dPro) directed relative antimicrobial activity towards Gram-positive bacterial species (see Table 1, above). We are currently assessing the anti-microbial and anti-biofilm properties of AB01 in both Gram-positive and negative species, with comparisons to a previously published linear AMP (Model 01) and a cyclized analog of Model 01 (AM11); see Fig. 2. Fig. 2 Model 01, an AMP of the (RW)n series (RW)4: (41): Ac-RWRWRWRW-conh2 AM11, a cyclized analog of the (RW)n series c(RW)3: Ac-Nle-c[Asp-RWRWRW-Lys]-dVal-dPro-conh2 AB01, a hybrid AMP/anti-biofilm peptide: Ac-FRIRVRV-c[Asp-RR-dNal(2')-FWR-Lys]-dVal-dPro-conh2 The initial results from these experiments (Fig 3A-F, below) clearly demonstrate the superior anti-microbial actions of AB01 (vs. Model 01 and AM11) against a model Gram-positive mycobacteria, M smegmatis, before and after biofilm production. We compared growth inhibition of cells attached to a plate surface (pre-biofilm formation), and for 1 and 2 days after attachment [after the biofilm developed (Figs 3A-C)]. These experiments were performed in 96 well plates, in which the control culture's attached growth rate was measured in the absence of an AMP. Attached cell growth and biofilm production was measured by crystal violet staining, with quantification in a plate reader at an absorbance of 561 nm (42). Control attached bacterial growth was designated as 100%, and the effect of added AMPs on the attached cell growth rate was quantified as a percent of the control growth (greater or lesser). The MIC (minimum inhibitory concentration for 100% suppression of attached cell growth) of AB01 was about 2-3µM during the initial growth phase (before a mature biofilm was secreted; Fig 3A), with an MIC of about 10µM against a mature biofilm (Figs 3B&C). Of the other two AMPs, Model 01 had the best activity; with an MIC of about 10µM in the M smegmatis biofilm growth phase (Fig. 3A), and >100µM after the biofilm was established (Figs. 3B&C).. Figs. 3D-F show the effects of the three AMPs on E. coli attached cell growth; initially (3D) and as a biofilm developed (3E&F). The initial MIC of AB01 was 100 µM; about 10-100-fold less effective than against a Gram-positive species (Fig 3A). This is consistent with the specificity data for different C-terminal dipeptides depicted in Table #1, since AB01 has a dipeptide relatively specific for Gram-positive bacteria. The two other AMPs showed some inhibition of growth at the early phase of bacterial cell attachment (Fig. 3D). All three AMPs showed less inhibition of growth as biofilm development continued. Oral Activity of an Allometrically Scaled AMP in Steers We successfully measured plasma levels of a model AMP, produced by our platform technology, in steers following oral administration. These data suggest that the evidence for small molecule transport systems in the rumen of calves and sheep (43), may account for the oral activity of our peptide drug. The AMP we used was our cyclized melanocortin antagonist; TCMCB07. We allometrically scaled the dose used in dogs to produce an increase in body weight. Allometric scaling involves the use of differences in body surface area to predict appropriate drug doses between species (29). Different drug classes show better or worse adherence to allometric scaling, depending on species-specific metabolism. Peptides are particularly good for this type of scaling; as endogenous substances in all mammals, there are similar metabolic pathways for metabolism and excretion. We previously found excellent allometric scaling for TCMCB07 (a cationic-aromatic peptide with melanocortin receptor antagonist activity) between rats and dogs in terms of plasma levels and effects on enhancing weight gain (see Fig. 4, below). Fig 4 (left) shows the effect of TCMCB07 on daily body weight (BW) in a canine 28 day safety study. Dogs were on a fixed food intake. Arrows on X axis denote when drug treatment was begun and ended. Red bars are when safety data was collected. Animals progressively gained weight on drug (becoming statistically significant by day 10, with a 13.5% increase in BW by day 24), and rapidly lost weight when drug treatment was ended (returning to baseline by day 36). This effect is analogous to (allometrically scales from) a TCMCB07-induced increase in BW of normal rats. The potential implications of finding any significant TCMCB07 oral activity in a ruminant is related to the way the oral activity of this peptide was discovered. Melanocortin antagonist effects on body weight require access to central nervous system melanocortin 4 receptors that are located behind the blood-brain-barrier [BBB (44, 45)]. We used our platform technology to develop a series of peripherally active melanocortin receptor antagonist peptides; i.e. peptides that would be transported across the BBB. The most potent of these peptides showed oral activity, suggesting a similar mechanism of transport. We've now confirmed the general aspects of our drug's oral activity and ability to enhance body weight gain in both rats and dogs, and have successfully applied the platform to produce orally active therapeutic peptides outside the cationic-aromatic class. Thus, the presence of TCMCB07 oral activity in steers suggests that AMPs produced by the platform will cross the BBB and potentially (depending on sequence) be able to interact with melanocortin receptors to control body weight.

    Publications