Source: UNIVERSITY OF NORTH TEXAS submitted to NRP
DECIPHERING PROANTHOCYANIDIN BIOSYNTHESIS IN ALFALFA
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
1002577
Grant No.
2010-65115-21833
Cumulative Award Amt.
$46,381.49
Proposal No.
2013-07169
Multistate No.
(N/A)
Project Start Date
Jun 1, 2013
Project End Date
Dec 14, 2014
Grant Year
2014
Program Code
[91413]- Plant Biology: Biochemistry
Recipient Organization
UNIVERSITY OF NORTH TEXAS
1155 UNION CIR #305250
DENTON,TX 76203-5017
Performing Department
(N/A)
Non Technical Summary
Alfalfa (Medicago sativa) is the world's major forage legume. One of its disadvantages is its potential for causing pasture bloat. The presence of proanthocyanidins [PAs] (flavonoid polymers) can protect ruminant animals from this potentially lethal condition by binding to proteins in the rumen. This reduces the rate of fermentation with resulting reduction in methane production, and increases rumenal by-pass protein, thereby improving nitrogen nutrition. Alfalfa foliage lacks PAs, and their introduction has been a yet unrealized goal of alfalfa breeding, which will likely require a biotechnological solution.Lack of information on the biosynthesis, assembly and vacuolar sequestration of PAs is severely limiting attempts at engineering the pathway in alfalfa to improve forage quality. This project will utilize a combination of biochemical and molecular genetic approaches to understand the formation of PAs in alfalfa (where they occur naturally in the seed coat). Two major types of genes will be studied: the transcription factors, or regulatory genes, that control the synthesis of PAs where they naturally occur (in the seed coat), and enzymes of the PA patheway itself. The goal is to identify the combination of genes that it is necessary to up-regulate in alfalfa foliage to allow for synthesis and accumulation of levels of PAs sufficient to protect against pasture bloat. The information gained is being translated directly to alfalfa improvement through a collaborative arrangement with Forage Genetics International. As we obtain new transgenic alfalfa lines expressing individual transcription factors, these are sent to FGI for incorporation into their alfalfa breeding program.
Animal Health Component
10%
Research Effort Categories
Basic
75%
Applied
10%
Developmental
15%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
20616401040100%
Knowledge Area
206 - Basic Plant Biology;

Subject Of Investigation
1640 - Alfalfa;

Field Of Science
1040 - Molecular biology;
Goals / Objectives
Alfalfa (Medicago sativa) is the world's major forage legume. One ofthe disadvantages of alfalfa is its potential for causing pasture bloat. The presence of proanthocyanidins [PAs] (flavonoid polymers) can protect ruminant animals from this potentially lethal condition by binding to proteins in the rumen. This reduces the rate of fermentation with resulting reduction in methane production, and increases rumenal by-pass protein, thereby improving nitrogen nutrition. Alfalfa foliage lacks PAs, and their introduction has been a yet unrealized goal of alfalfa breeding, which will likely require a biotechnological solution.This project will utilize a combination of biochemical and molecular genetic approaches to understand the formation of PAs in alfalfa (where they occur naturally in the seed coat). Use will be made of the model M. truncatula for proof-of-concept genetic studies. The information gained will be translated directly to alfalfa improvement through a collaborative arrangement with Forage Genetics International, thus contributing directly to the program goal of "creating improved agricultural plant lines or populations through use of basic biochemical knowledge and biotechnology".Majorgoals/objectives are:1. To complete the analyses of the chemical composition and transcriptomes of transgenic alfalfa lines expressing the MtTT2, MtMYB5 and MtPAR/LAP1 trasncription factors. We will also provide the transgenes, in the alfalfa variety Regen SY, to our commercial partner, Forage Genetics International, who will be incorporating the materials into their breeding program.2. To complete our studies on the mechanisms of action of Medicago/alfalfa transcription factors for engineering condensed tannins in alfalfa foliage; these studies will involve in vitro assays for determining transactivation of the anthocyanidin reductase and leucoanthocyanidin reductase (LAR) promoters.3.To further examine the role of LAR in condensed tannin biosynthesis, based on our recent observation that mutation of LAR blocks tannin synthesis in Medicago even though the natural tannins do not contain catechin (the product of LAR in vitro).We believe that these studies will represent the final breakthrough in engineering a bloat-safe alfalfa that contains sufficient tannins to protect protein from too rapid degradation in the rumen.
Project Methods
We have started to determine the impacts of co-expression of MYB5 and MtTT2 (Mt MYB14)and TaMYB14 on PA accumulation in alfalfa foliage. This is done by genetically transforming alfalfa plants with constructs harboring these transcrition factor genes. Plants are then analyzed for PA levels by staining, and analysis by high performance liquid chromatography. Success is evaluated by the extent to which PAs accumuate in the target tissues (leaves and stem).We are examining whether a quaternary complex of MtTT2 (MYB14), TT8,WD40-1 and MYB5 exists in vivo by co-immunoprecipitation assays with tagged MYB5 and MYB14 expressed in cultured roots. We are also addressing the same problem using abimolecular fluorescence complementation approach in protoplasts. Success is evaluated by the consistency of results supporting the presence of physical complexes of these proteins on the target gene promoter and dependent upon the presence of all components.We are evaluating the position of the enzyme leucoanthocyanidin reductase in the PA pathway in Medicago through analysis of transposon insertion mutants in this gene. Success is evaluated by a consistent PA phenotypefrom multiple mutant alleles.

Progress 06/01/13 to 12/14/14

Outputs
Target Audience: Scientific community (through a publication in Plant Physiology) Industry (through meetings with a corporate partner (Forage Genetics International) Government/Industry (through discussions with scientists and administrators from AgResearch/Grasslanz Technology, New Zealand). On the basis of the success we have made on this project, AgResearch/Grasslanz have entered into a new sponsored research agreement with the PI for work on engineering proanthocyanidins in row crops. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided? Dr Chenggang Liu (postdoctoral fellow) was appointed Research Assistant Professor at the University of North Texas. He worked on this project during the final year of no-cost extension, and gained experience in grant writing and personnel management in addition to his research training. How have the results been disseminated to communities of interest? Yes: To the scientific community (through a publication in Plant Physiology) To industry (through meetings with a corporate partner (Forage Genetics International) To government/Industry (through discussions with scientists and administrators from AgResearch/Grasslanz Technology, New Zealand). On the basis of the success we have made on this project, AgResearch/Grasslanz have entered into a new sponsored research agreement with the PI for work on engineering proanthocyanidins in row crops. What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? In the second no-cost extension, we have achieved the following: We published our results about MYB5 and MYB14 in Plant Physiology (Liu, et al, 2014). Our results demonstrated that MYB5 and MYB14 act synergistically to promote PA biosynthesis in Medicago. In collaboration with our commercial partner, Forage Genetics International, we generated alfalfa plants co-expressing various transcriptional factors regulating PA biosynthesis, including MtLAP1, MtMYB5, MtMYB14, and others (proprietary). We analyzed the PA contents and compositions of these alfalfa lines co-expressing various transcription factors. We have begun a detailed metabolic analysis of mutants of Medicago truncatula with loss of function of anthocyanidin reductase and leucoanthocyanidin reductase, Outcomes Based on our transactivation assays, we found that MYB5 and MYB14 can synergistically activate the promoters of the key structural genes of PA biosynthesis, ANR and LAR, in an MtTT8 and MtWD40-1 dependent manner. More importantly, we demonstrated that MYB5 and MYB14 can form a quaternary complex with MtTT8 and MtWD40-1 in contrast to the general concepts that MYB5 and MYB14 form separate ternary complex with MTTT8 and MtWD40-1. Our results reveal a novel mechanism of PA biosynthesis regulation. Based on these results, we hypothesized that co-expression of MYB5 and MYB14 could enhance the PA content of alfalfa leaves. Since we had difficulty in obtaining alfalfa expressing high level of MYB5 and MYB14 independently, presumably due to the fact that high levels of PA inhibit the regeneration of plants from somatic embryos during the tissue culture procedure, we first generated alfalfa lines expressing moderate levels of MYB5 or MYB14 transcripts, and then crossed the MYB5 and MYB14 expressing plants to obtain alfalfa lines co-expressing MYB5 and MYB14. Our results indicated that co-expression of MYB5 and MYB14 significantly increase PA content in alfalfa leaves as judged by the DMACA staining technique. In collaboration with our commercial partner, we also generated alfalfa co-expressing MYB14 and other transcription factors (proprietary). Our results indicated that co-expression of additional TFs can enhance the PA content of MYB14 expressing alfalfa, to levels that could be sufficient to prevent pasture bloat in livestock. However, we also observed that when the harvested alfalfa material was stored for prolonged times More than 2 months, the extractable soluble PA level dropped dramatically. We believe that the oxidation process after harvest is converting the soluble PA into insoluble PA, suggesting a need for additional studies to better understand the PA oxidation and polymerization process in alfalfa. The PA composition analyses of these improved alfalfa lines indicated that they produce exclusively epicatechin-based PA, similar to the PA produced in alfalfa seed coats. The mean degree of polymerization ranged from 2 to 15. In addition, we also observed that there are significant levels of anthocyanin in these PA producing alfalfa. We also observed that a MYB transcription factor, MtMYB2, which functions as an suppressor of anthocyanin biosynthesis, is strongly induced by MYB5 and the MYB transcription factor LAP1; this suggests that plants producing high levels of PAs may actively suppress anthocyanin biosynthesis to prevent anthocyanin toxicity. Genetic down-regulation of anthocyanin repressor expression in strongly PA producing alfalfa may therefore lead to increased PA production without accumulation of excess anthocyanin. Experiments to test this hypothesis are currently underway, using Medicago hairy roots as a model system. Analysis of mutants of Medicago truncatula with loss of function of anthocyanidin reductase (ANR) or leucoanthocyanidin reductase (LAR) has led us to new hypotheses about the pathway to PAs in M. truncatula and alfalfa. Essentially, loss of function of ANR leads to an expected phenotype, with reduction of PA level and accumulation of anthocyanins, a similar phenotype to that seen in Arabidopsis. However, the LAR loss of function mutant is impacted in PA biosynthesis, even though the PAs affected do not appear to contain catechin, the expected product of LAR. We believe that LAR has functions in PA biosynthesis beyond the formation of catechin. In summary, the work supported by this project has led to major breakthroughs in understanding the PA pathway, and in the engineering of proanthocyanidins for forage quality improvement in alfalfa.

Publications

  • Type: Journal Articles Status: Published Year Published: 2014 Citation: Liu, C., Jun, J and Dixon, R.A. (2014). MYB5 and MYB14 play pivotal roles in seed coat polymer biosynthesis in Medicago truncatula. Plant Physiology 165, 1424-1439.


Progress 06/01/13 to 05/31/14

Outputs
Target Audience: Please note that, although the request to transfer this grant from the Noble Foundation to the University of North Texas was made in early 2013, with a planned start date of June 1, 2013, the funds were not transferred and available to the PI until 3/20/2014 (approximately 2 months ago). This therefore impacts the progress in all criteria. However, we do have progress to report. Target audiences include: Commercial partners (Forage Genetics International, with whom we shared information in April 2014 and who are working with us towards commercialization of tannin-containing alfalfa, and AgResearch New Zealand, who we met with earlier in May 2014 and who have expressed an interest in funding tannin technology in other crops). American Society of Nutrition. Dr Dixon presented a lecture, entitled "Biosynthesis of flavanols within plants and bioavailability to humans"in a symposium on flavanols at a session of the ASN in San Diego in early May 2014. Changes/Problems: This project at UNT started 9 months late due to problems in transferring the funds (closing down the Noble Foundation grant and starting the new award at UNT). The problem was not at UNT's end. Work continued during this down-period as Dr Liu was hired and paid by UNT, but the funds for the operating expenses did not arrive at UNT until March 2014. What opportunities for training and professional development has the project provided? Dr Chenggang Liu, who is performing the research with salary funding from UNT, wrote the manuscriptdescribed above, with assistance for the PI. How have the results been disseminated to communities of interest? Through verbal communication (research presentations) to commercial partners What do you plan to do during the next reporting period to accomplish the goals? Complete the analysis of LAR and ANR mutants. Analyze transgenic alfalfa expressing both MYB14 and MYB5 transcription factors, Based on in vitro transactivation assays, we predict that these plants will accumulate large amounts of tannins, unless these should prove toxic

Impacts
What was accomplished under these goals? 1. Alfalfa plants expressing MYB5, MtPAR and Mt LAR have been supplied to our commerical partner Forage Genetics International and have entered their breeding program. Data indicate success in engineering tannins in the aerial portions of the plant. 2. Studies on the effects of MYB5 and other transcription factors on the transactivation of the ANR and LAR promoters have been completed. Data suggest the operation of a quaternary transcription complex. These results have been written up, and the manuscript below is currently in review with Plant Physiology: Chenggang Liu, Ji Hyung Jun and Richard A. Dixon. MtMYB5 and MtMYB14 play pivotal roles in seed coat polymer biosynthesis in Medicago truncatula 3. We have made the exciting discovery that mutants in Medicago LAR, believed to be simply an enzyme of catechin biosynthesis, completely lack soluble tannins (which are primarily made of epicatechin), but produce more insoluble tannins, whereas mutants in ANR (the enzyme that makes epicatechin) lack both soluble and insoluble tannins. This completely changes our picture of tannin biosynthesis and the roles of these enzymes. We are currently performing metabolomic analysis on the mutants.

Publications