Source: CSU FOOT HILLS CAMPUS submitted to NRP
MOLECULAR EPIDEMIOLOGY AND NATURAL CYCLE OF VESICULAR STOMATITIS VIRUS
Sponsoring Institution
Agricultural Research Service/USDA
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
0403583
Grant No.
58-1940-0-012
Cumulative Award Amt.
(N/A)
Proposal No.
(N/A)
Multistate No.
(N/A)
Project Start Date
Sep 1, 2000
Project End Date
Aug 31, 2005
Grant Year
2000
Program Code
[(N/A)]- (N/A)
Recipient Organization
CSU FOOT HILLS CAMPUS
(N/A)
FT COLLINS,CO 80523
Performing Department
(N/A)
Non Technical Summary
(N/A)
Animal Health Component
10%
Research Effort Categories
Basic
80%
Applied
10%
Developmental
10%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
3113310104040%
3113410104030%
3113510104020%
3113810104010%
Goals / Objectives
The objective of this cooperative research project is to determine the distribution and basic epidemiological characteristics of VSV in endemic and non-endemic areas, and to determine the ecological factors associated with the natural cycle of VSV through the use of genetic analysis and molecular epidemiology. The additional objective is to assist ARS in establishing the necessary conditions for field validation of VSV rapid real-time RT-PCR diagnostic tests in well-documented and non-infected cattle herds in Costa Rica and Mexico.
Project Methods
The approach consists of field sample collection, virus isolation, virus detection and epidemiological data collection and analysis done at CSU and genetic sequencing and phylogenetic analysis done at PIADC-ARS. Scientific personnel and graduate students from CSU with expertise in veterinary epidemiology will carry out work both at CSU and ARS-PIADC. CVEADSS at CSU will provide epidemiological data regarding VSV. These data will be obtained from their field activities/research sites presently existing in the western United States, and Central America. CSU will provide ARS with epidemiology expertise and field samples from study sites including various strains of VSV and viral RNA for genetic sequencing and phylogenetic analysis. ARS will provide expertise in molecular biology and phylogenetic analysis to determine the origin of VSV strains and help understand the natural life cycle of VSV. The approach will include the identification herds that are affected by clincial vesicular stomatits, collection of samples from animals with vesicular disease and/or appropriate negative control populations and collection and analysis of data associated with each sample and laboratory analysis performed on them.

Progress 09/01/00 to 08/31/05

Outputs
4d Progress report. This report serves as the final report for research conducted under a specific cooperative agreement between ARS and Colorado State University. Additional details can be found in the report for the parent CRIS 1940- 32000-040-00D "Pathogenesis and Genomics of Vesicular Stomatitis Viruses and Foot and Mouth Disease". This project is in collaboration with the Center for Veterinary Epidemiology and Animal Disease Surveillance Systems (CVEADSS) at the Department of Environmental Health at Colorado State University, Fort Collins, Colorado (CSU). The purpose of this collaborative research is to investigate epidemiological relationships of VSV and use knowledge gained to better understand the life cycle of VSV. An amendment has been made to this project in order to include a new objective: to assist ARS in the evaluation and validation of rapid diagnostic real-time PCR for VSV. In the field VSV epidemiological study in endemic areas of Mexico, a large amount of data has been collected and are still being analyzed. But over the life of the project it the endemic activity of VSV in southern Mexico was clearly documented. Additional important differences were observed in temporal and geographical distribution of infections between different ecological zones. Most infections occurred with the rainy season and during times when the blood-feeding insects were most commonly found. In addition samples from vsv-negative cattle in the state of Colorado, were collected in order to validate a rapid diagnostic test based on real-time RT-PCR. A total of 1534 cattle from 30 different operations were sampled for this study by July 19th, 2005. The criterion for selection of these operations was based on the owner's willingness to collaborate with this study and their location in the State. The operations were located in the north east of Colorado, far from the only one case of VSV in cattle registered in Montrose County (South West) in July 2005. Oral swabs were collected from 1529 cattle and serum samples were collected from all 1534 animals. These samples were submitted to the California Animal Health and Food Safety Laboratory in Davis for testing. Testing of the first 700 sampels did not show any false positive results. Testing is ongoing at UC Davis. Analysis of the data collected at study sites on VSV-endemic areas of Mexico has resulted in the preparation of a manuscript entitled Geographic and Environmental Factors Associated to Vesicular Stomatitis Outbreaks In Mexico (1981-2000) that has been submitted for publication.

Impacts
(N/A)

Publications


    Progress 10/01/03 to 09/30/04

    Outputs
    4. What were the most significant accomplishments this past year? D. Progress Report: This report serves to document research conducted under a specific cooperative agreement between ARS and Colorado State University. Additional details can be found in the report for the parent CRIS 1940- 32000-040-00D "Pathogenesis and Genomics of Vesicular Stomatitis Viruses and Foot and Mouth Disease". This project is in collaboration with the Center for Veterinary Epidemiology and Animal Disease Surveillance Systems (CVEADSS) at the Department of Environmental Health at Colorado State University, Fort Collins, Colorado (CSU). The purpose of this collaborative research is to investigate epidemiological relationships of VSV and use knowledge gained to better understand the life cycle of VSV. An amendment has been made to this project in order to include a new objective: to assist ARS in the evaluation and validation of rapid diagnostic real-time PCR for VSV. Current status of the collection of samples from vsv-negative cattle in the state of Colorado, USA: A total of 527 cattle from 13 different operations (dairy and beef types) were sampled for this project as of July 15th, 2004. Oral swabs and serum samples were collected from all 527 animals. In addition, hoof swabs were collected from 46 adult dairy cows. A total of 1100 samples (oral swabs, hoof swabs and serum samples) were collected, identified, and stored at -70oC according to the approved standard operating procedures. A database containing information on individual farms were completed and are available upon request. Production data and other characteristics of the tested animals, such as presence or absence of VSV-like lesions, were recorded in the database if available at the farm, as described in the original protocol. The collection of samples will continue in dairy operations from Colorado until sample size requirements are satisfied. Analysis of the data collected at study sites on VSV-endemic areas of Mexico has resulted in the preparation of a manuscript entitled "Geographic and Environmental Factors Associated to Vesicular Stomatitis Outbreaks In Mexico (1981-2000)" that will be submitted for publication.

    Impacts
    (N/A)

    Publications