Source: AUBURN UNIVERSITY submitted to NRP
SURVIVAL OF S. ENTERICA AND E. COLI O157:H7 IN SOIL AND INTERNALIZATION INTO LEAFY GREENS AS AFFECTED BY THE PRESENCE OF BIOCHAR AND FUNGI
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
0230246
Grant No.
2012-67012-19877
Cumulative Award Amt.
$130,000.00
Proposal No.
2012-01363
Multistate No.
(N/A)
Project Start Date
Sep 1, 2012
Project End Date
Aug 31, 2014
Grant Year
2012
Program Code
[A7201]- AFRI Post Doctoral Fellowships
Recipient Organization
AUBURN UNIVERSITY
108 M. WHITE SMITH HALL
AUBURN,AL 36849
Performing Department
Poultry Science
Non Technical Summary
The U.S. leafy green market is annually valued at over $2 billion and leafy greens have been considered the "riskiest food regulated by the FDA" (by the Center for Science in the Public Interest) with a total of 363 foodborne outbreaks involving 13,568 illnesses, primarily due to Salmonella and pathogenic E. coli. Ongoing research conducted at the USDA, ARS in Wyndmoor, PA has determined that naturally symbiotic arbuscular mycorrhizal fungi as well as biochar byproducts from the production of fast pyrolysis biofuel, when added to crop soil, may affect the survival and internalization of Salmonella and E. coli O157:H7 into Romaine lettuce roots and stems. This research project will investigate the influence of biochar and arbuscular mycorrhizal fungi on survival of Salmonella, E. coli O157:H7 and other shiga toxin-producing E. coli (STEC) in soil and internalization into leafy greens.
Animal Health Component
60%
Research Effort Categories
Basic
20%
Applied
60%
Developmental
20%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
7121430110025%
7121451110025%
7122499110025%
7124010110025%
Goals / Objectives
The objectives proposed for this research are to (1) determine the influence of varying levels of biochar on the survival of Salmonella and E. coli O157:H7 in crop soil under varying climate-controlled conditions, (2) to assess the influence of the arbuscular mycorrhizal fungus (AMF) Glomus intraradices on internalization and survival of Salmonella and E. coli O157:H7 in leafy greens, in scaled-up conditions and (3) to evaluate the effects of AMF x biochar on reducing the survival of Salmonella and E. coli O157:H7 in soil and internalization and survival in leafy greens.
Project Methods
The approach designed to execute the three objectives of this research project are as follows: (I) The influence of varying levels of biochar on the survival of Salmonella and E. coli O157:H7 in crop soil under varying climate-controlled conditions will be determined. Variables include 4 biochars added to soil at 4 amendment levels (0, 1, 3, and 5%). Soil will be inoculated with E. coli O157:H7 or Salmonella enterica. Soil moisture will be adjusted to 2 final levels (3 and 15%), representing low and medium moistures and sampled for up to 6 months. Next, (II) the influence of the arbuscular mycorrhizal fungus (AMF) Glomus intraradices on internalization and survival of Salmonella and E. coli O157:H7 in leafy greens, in scaled-up conditions will be assessed. Romaine lettuce will be cultivated with or without AMF and inoculated. Plant roots, shoots and soil will be sampled weekly for 8 weeks. Finally, (III) the effects of AMF x biochar on reducing the survival of Salmonella and E. coli O157:H7 in soil and internalization and survival in leafy greens will be evaluated. These experiments will include (1) Two of the best biochar soil amendments, (2) added at one amendment level, (3) inoculated with one pathogen (4) with and without AMF. Root, shoot and soil will be microbiologically sampled up to week 8 and plant growth measured via plant height, live weight and dry weight, to determine interactions between biochar and plant growth.

Progress 09/01/12 to 08/31/14

Outputs
Target Audience: The target audience included; crop farmers, biochar producers, biofuel producers, and food safety scientists. Changes/Problems: Nonpathogenic bacteria had to be used because the USDA-Eastern Regional Research Center was not properly equipped to handle Romaine Lettuce plants and soils that were contaminated and grown in the presence of Biosafety Level 2 pathogens. What opportunities for training and professional development has the project provided? While this was a Post Doctoral grant aimed at advancing my career, my mentor (Josh Gurtler) and collaborators at the USDA Easter Regional Research Center, where the research was performed, only saw this as a cheap way to get more papers published. Little to no effort was made on my mentor's part to provide career advice, professional development or advancement. Therefore, this opportunity provided little to no training and professional development for me (Zac Williams) as the post doc and principle investigator. How have the results been disseminated to communities of interest? Manuscripts are being written for peer reviewed research journals. Results were presented at several universities in the area. What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? The first experiment utlized specially forumlated crop soils, E. coli, Salmonella and 4 types of pyrolysis char. The soil was stored for 6 months at 37 degrees Celcius. Samples were taken every two weeks and analyzed for Salmonella and E. coli survival. The research project found that biochar produced from slow pyrolysis helps Salmonella and E. coli survivalin crop soils, and that fast pyrolysis biochar hinders the survival of the bacteria. The second project utilized Salmonella, crop soils, biochar, and Romaine lettuce plants. Soil was contaminated with Salmonella and planted with a variety of Romaine Lettuce. Samples were taken from the soil and lettuce leaves every week and analyzed for survival of Salmonella and plant weight. It was observed that slow pyrolysis char reduced seed germination time, while fast pyrolysis char hindered germination in two-thirds of the plants. Neither char had any effect on Salmonella survival.

Publications


    Progress 09/01/12 to 08/31/13

    Outputs
    Target Audience: Target audience during this period includes; biochar manufacturers, row crop farmers, anyone interested in sustainable agriculture, food safety, and environmental microbiologists. Changes/Problems: Due to changes in the safety regulations within the USDA ARS, non-pathogenic E. coli and Salmonella will be used for goals 2 and 3. What opportunities for training and professional development has the project provided? Training was received from Dr. Boateng and his staff, on fast and slowpyrolysis and biochar production. Training was received from Dr. Douds on preparing the soil to be used in the study. How have the results been disseminated to communities of interest? Nothing Reported What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

    Impacts
    What was accomplished under these goals? The first step was to secure enough biochar, through both fast pyrolysis and slow pyrolysis, for the entire study. With the help of Dr. Boateng’s group four biochars were made using, switch grass pellets, unpelleted switch grass, hardwood pellets. After biochar was obtained, sufficient soil was made using a mixture of; sand, turface, soil and vermiculite, from Dr. Douds. In accordance with the first objective of the grant, soil was inoculated with E. coli O157:H7 and Salmonella enterica. Soil was then treated with biochar, at either 1, 3 or 5% Weight:Weight, and sampled every other week starting February 26, 2013; sampling will continue until August 2013. At the four month mark, there is a 1-3 log10 cfu/g soil reduction in Salmonella, and a 4-5 log10 cfu/g soil reduction in E. coli O157:H7, caused by treatment of biochar, regardless of biochar type. Preliminary data indicates biochar application to crop soil may provide a substantial reduction in pathogen. This will satisfy goal 1.

    Publications