Source: UNIV OF NEW MEXICO submitted to NRP
SECOND GENERATION PARATRANSGENESIS FOR CONTROL OF PIERCE`S DISEASE OF GRAPES
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
0224497
Grant No.
2010-33120-21852
Cumulative Award Amt.
$400,000.00
Proposal No.
2010-02706
Multistate No.
(N/A)
Project Start Date
Sep 1, 2010
Project End Date
Aug 31, 2013
Grant Year
2010
Program Code
[HX]- Biotechnology Risk Assessment
Recipient Organization
UNIV OF NEW MEXICO
(N/A)
ALBUQUERQUE,NM 87131
Performing Department
(N/A)
Non Technical Summary
Despite advances in public health, insect-transmitted diseases remain a leading cause of morbidity and mortality. Additionally, the global impact of diseases to agriculture exceeds $100 billion. Currently,the best methods for control of many insect-borne diseases involve the use of pesticides which are toxic, expensive and allow evolution of insect resistance. Evolving methods for control of vector-borne diseases rely on modification rather than elimination of insects. These strategies involve either direct transformation of an insect genome or expression of gene products in the insect via transformed symbiotic microbes (paratransgenesis). Paratransgenesis is a "Trojan Horse" approach to control of disease transmission. It employs the interactions between disease-transmitting vectors, bacterial symbionts of the vectors and transmitted pathogens. Symbiotic bacteria are isolated and genetically transformed to export molecules that interfere with pathogens.The genetically altered symbionts are then introduced into the host vector where expression of engineered molecules affects the host's ability to transmit the pathogen.Pierce's Disease is a deadly disease of grapevines causing tremendous economic loss to the wine industry of California each year. It is caused by the bacterium Xylella fastidiosa, which is spread by xylem-feeding sharpshooters. The predominant vector of this disease in the US is the Glassy Winged Sharpshooter (GWSS), Homalodisca vitripennis. Pierce's Disease is prevalent within the USA from Florida to California, and outside the USA in Central and South America. In the paratransgenic approach, a commensal bacterium of H. vitripennis, Alcaligenes xylosoxidans var. dentrificans (AXD), is modified to export molecules that disrupt the transmission of X. fastidiosa, the causative agent of Pierce's disease of grapevines. Both AXD and Xylella colonize the anterior mouthparts (cibarium) of H. vitripennis, thus assuring that exported molecules from AXD contact Xylella and interrupt transmission to plants. Broadcast of engineered Alcaligenes to field sites such as vineyards with subsequent uptake by sharpshooters would result in disruption of regional Xylella transmission. Release of genetically engineered Alcaligenes could pose environmental risks: (1) Alcaligenes species have been associated with human diseases such as pneumonia in immunocompromised persons.(2) Potential horizontal gene transfer to other microbes of the environmental consortium could pose risks above and beyond scenarios involving release of unmodified organisms. Field application of the paratransgenic strategy for control of Pierce's disease would therefore require additional measures to contain human contact with Alcaligenes and minimize gene spread in the environment. This proposal introduces the concept of second generation paratransgenics in which advanced material engineering at the nano- and micro-scale is used to target release of engineered microbes and restrict gene transcription to highly specific sites of pathogen residence within the arthropod itself, with the aim of greatly reducing the risk of foreign gene release into the environment.
Animal Health Component
(N/A)
Research Effort Categories
Basic
100%
Applied
(N/A)
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
2151131104025%
2151131110025%
2151131113025%
2151131200025%
Goals / Objectives
The overall aim of this three-year project is to develop a second generation paratransgenic approach to delivery of engineered Alcaligenes xylosoxidans denitrificans (AXD) to Homalodisca vitripennis, the arthropod vector of Xylella fastidiosa, causative agent of Pierce's disease of grapevines. This proposal will focus on strategies to contain unwanted environmental spread of recombinant bacteria and potential horizontal gene transfer (HGT) of foreign DNA. Specific Aim 1: To develop a synthetic alginate-chitosan microsphere for encapsulation and field delivery of engineered AXD to H. vitripennis Specific Aim 2: To establish efficacy of a synthetic alginate-chitosan microsphere in preventing environmental escape of recombinant AXD and horizontal gene transfer of foreign DNA to environmental bacteria Specific Aim 3: To establish in closed-cage settings the efficacy of a Resin-Microsphere System (RMS) in delivery of engineered AXD to the cibarial region of H. vitripennis TIMELINE, DELIVERABLES Month 6 Formulation of Alginate-Chitosan Microsphere; Bacterial stability; pH-gated release of bacteria/re-design with new polymers as needed ALC Microsphere with desired characteristics Month 18 Containment of R-AXD by ALC Microsphere Prevention of HGT and transfer within earthworm; ALC Microsphere with containment properties Month 24 Development of Resin Microsphere System Microsphere stability, water impermeability and coating of plants/ re-design as needed RMS that permits microsphere viability and water impermeability Month 36 Simulated field trial with H. vitripennis and grape plants Delivery of R-AXD via RMS; colonization of cibarium; no release into rhizosphere; Proof-of-concept in simulated conditions of targeted release of R-AXD Expected Outcomes and Alternative Approaches: We expect the alginate microspheres to provide partial protection of the R-AXD. Whereas, freezing temperatures will cause death of most control AXD, we expect a statistically significant increase in survival of the microsphere-encased population. Similar results are expected for the trials involving extremes of high UV light and aridity. We expect the alginate matrix to prevent HGT in either direction. Comparison of recombinant events between the experimental (alginate microspheres) and control (liquid co-incubation) groups should reveal a statistically significant difference that validates the hypothesis. Again, we expect that ALC microspheres will prevent release of R-AXD into the gut of the earthworm and secondary sequelae such as HGT within gut microbial consortia. There should be a very significant difference in free R-AXD in the gut lumen of experimental versus control worms. In the absence of high fluid flux, ingested ALC microspheres are expected to remain closed with no leakage of R-AXD into the gut of the worm. If the RMS performs in a similar fashion to CRUZIGARD, we expect stability of the ALC microspheres and water impermeability of the matrix itself. Since the R-AXD bacteria are stabilized within the microspheres, it is possible that they will remain viable for the entire duration of 6 months.
Project Methods
We will develop an alginate-chitosan microsphere for encapsulation of genetically modified AXD stabilized at an acidic pH of 3.7 and gated to open under high fluid flux and pH change (greater than 7.5).The associated flow of fluid at a neutral pH through the mouthparts and anterior gut of the insect will serve as the gating mechanism that causes swelling of the alginate microspheres and release of recombinant AXD (R-AXD). Experiment 1: Synthesis and characterization of Alginate-Chitosan (ALC) microspheres.Alginate microcapsules will be synthesized and loaded. Experiment 2: Containment of AXD within ALC microspheres R-AXD will be encapsulated. Containment of R-AXD will be verified by 3 methods: (1) Fluorescence microscopy (2)Serial washes of ALC microspheres 3)Washed spheres will be immersed in fluid that approximates xylem (pH =7.5) Experiment 3: Microsphere function under extreme environmental conditions Alginate microspheres containing R-AXD will be subjected to simulated conditions of extreme environmental stress: heat, light, aridity. Experiment 4: Containment of bacteria and genetic material in the setting of microbial consortia.Populations of R-AXD contained within alginate microspheres will be exposed microbes commonly found in soil consortia to determine the extent of horizontal gene transfer.2)We will evaluate possible HGT from donor bacteria of the rhizosphere to recipient AXD contained in alginate microspheres. Experiment 5: Containment of recombinant AXD upon ingestion of microspheres by the earthworm, L. terristris. We will evaluate the barrier functions of the alginate-chitosan microsphere in the gut of L. terristris. Experiment 6: Development of a water impermeable Resin Microsphere System (RMS) for field application. In this set of experiments, we will design a RMS for containment of ALC microspheres that will (1) provide a barrier against rain, (2) permit stability of ALC microspheres, (3) permit coating of shoots of grape vines where H. vitripennis is likely to feed, and (4) permit probing and release of ALC microspheres during the initial phase of penetration of the shoot by H. vitripennis. Experiment 7: Delivery of R-AXD to the cibarium of H. vitripennis For this experiment we will use adult H. vitripennis collected from citrus orchards at the Agricultural Operations at UC Riverside. This 3-year program will develop new tools for the delivery of engineered symbiotic bacteria in a paratransgenic system. Robust methods for containment of genetically engineered microorganisms are possible given recent developments in nano-scale material engineering and controlled release. We propose to adapt these technologies to the prevention of arthropod-borne infectious diseases while minimizing risk of transgene delivery. Several other potential applications are already under development in the Durvasula lab related to delivery of engineered symbiotic bacteria to triatomine bugs and larval stages of phlebotomine sand flies. We expect to develop these strategies toward control of other arthropod-borne agricultural diseases and continue to expand the armamentarium against these devastating global scourges.

Progress 09/01/10 to 08/31/13

Outputs
Target Audience: 1. Entomologists with interest in control of vector-borne disease 2. Agriculturalists in international communities who are developing field-based strategies to enhance output 3. Biotechnologist with a focus on environmental applications 4. Global health officials with interst in global food security and agricultural output Changes/Problems: This grant was transferedfrom the University of New Mexico to the Biomedical Research Institute of New Mexico (BRINM) in July 2011. The new award number for this is 20-10-33120-19651, proposal number 2012-02379, accession number 0229441. This is the final report for this award from the University of New Mexico. All subsequent annual reports for this award will be submitted via BRINM. What opportunities for training and professional development has the project provided? This grant is currently supporting the stipend of agraduate student and a post-doctoral associate. How have the results been disseminated to communities of interest? Dr. Ravi Durvasula and Adam Forshaw were invited to present plenary seminars at the 1st Biodesert Consortium on Bacterial Symbiosis, Tunis, Tunisia. Molecular tools, environmental release strategies and the use of a microbial encapsulation strategy for risk mitigation of the paratransgenic vector control appraoch were presented to an international audience of scientists and students from US, Europe and North Africa. What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? 1) We have successfully developed an alginate-based calcium/barium hybrid microparticle with a Ca2+-ALG core and Ba2+-ALG shell that successfully contains "payload" microbes in liquid solution while maintaining microbe viability until the particles are dissolved 2) We have successfully demonstrated "tuning" the particle release profiles, where microbes can diffuse from the particle at variable rates depending on cross-linker composition (Ba2+:Cal2+) 3) We have successfully encapsulated P. agglomerans and B. subtilis and have demonstrated their rescue from the microcapsule as well as enhanced viability within the capsule 4) We have validated the premise that alginate microspheres would provide resistance to environmental insult such as ultraviolet radiation by demonstrating increased survival of encapsulated microbes when exposed to high energy UVC radiation 5) All attempts at forcing horizontal gene transfer (HGT) of our engineered DNA plasmid to Pseudomonas fluorescens and native P. agglomerans in liquid media, soil and other HGT-promoting environments have failed. This is encouraging since it suggests that theengineered DNA is unsuitable for bacterial uptake except under very, very specific laboratory conditions and thus lowers the likelihood for environmental contamination

Publications

  • Type: Conference Papers and Presentations Status: Published Year Published: 2011 Citation: Durvasula R. Paratransgenic approaches to arthropod-borne disease - Act 1 (invited seminar)
  • Type: Conference Papers and Presentations Status: Published Year Published: 2011 Citation: Forshaw A and Durvasula R. Microencapsulation as a strategy for implementation and environmental safe-guarding of a paratransgenic approach to control of vector-borne diseases - Act 2, Risk assessment and mitigation (invited seminar)
  • Type: Conference Papers and Presentations Status: Published Year Published: 2011 Citation: Forshaw A, Arora A and Durvasula R. Microencapsulation of transgenic B. subtilis within chitosan-coated alginate microspheres


Progress 09/01/10 to 08/31/11

Outputs
OUTPUTS: Current outputs for USDA 2010-33120-21852 include: MICROENCAPSULATION OF TRANSGENIC BACILLUS SUBTILIS WITHIN CHITOSAN-COATED ALGINATE MICROSPHERES, American Society of Tropical Medicine and Hygiene, Philadelphia PA, 2011, (Poster presentation). Initial results regarding encapsulation of engineered bacteria were presented via oral poster session to interested parties at the ASTMH annual meeting in Philadelphia. PARATRANSGENIC APPROACHES TO ARTHROPOD-BORNE DISEASE -ACT 1, 1st Biodesert Consortium on Bacterial Symbiosis, Tunis Tunisia (Invited Seminar). In this plenary seminar, Dr. Durvasula (PI) provided a comprehensive overview of paratransgenic strategies directed at control of vector-borne disease. Molecular tools and environmental release strategies under development in the Durvasula Lab were presented to an international audience of scientists and students from US, Europe and North Africa (Morocco, Algeria, Tunisia and Libya). PARATRANSGENIC APPROACHES TO ARTHROPOD-BORNE DISEASE - ACT 2 (RISK ASSESSMENT AND MITIGATION), 1st Biodesert Consortium on Bacterial Symbiosis, Tunis Tunisia, 2011 (Invited Seminar. In this plenary seminar, Adam Forshaw (Research Fellow) introduced the idea of microbial encapsulation for risk mitigation of paratransgenic vector control strategies. Preliminary results of early encapsulation experiments were presented to an international consortium of scientists expert in the field of insect-microbial symbiosis. MICROENCAPSULATION AS A STRATEGY FOR IMPLEMENTATION AND ENVIRONMENTAL SAFE-GUARDING OF A PARATRANSGENIC APPROACH TO CONTROL OF VECTOR-BORNE DISEASES (Provisional Patent, # 2011-057-02) This provisional patent outlines microencapsulation strategies that can be used to deliver genetically engineered bacteria to disease-transmitting arthropods under field conditions. Composition of microspheres and methods of encapsulation and monitoring of microorganisms are described in detail. PARTICIPANTS: Dr. Ravi Durvasula, MD (Principal Investigator) Chief of Medicine and Acting ACOS for Research New Mexico VA Health Care System Vice Chairman for VA Affairs Professor of Medicine Director, Center for Global Health University of New Mexico School of Medicine Albuquerque, NM-87131. Dr. Thomas A. Miller, PhD (Collaborator) Professor of Entomology Entomology Department University of California Riverside, CA-92521. Adam Forshaw Howard Hughes Medical Inst. Research Fellow University of New Mexico School of Medicine Albuquerque, NM-87131. Arinder K. Arora Graduate Student, Biology Department University of New Mexico, Albuquerque NM-87131. Sudeep Kumar Post Doctoral Fellow Department of Internal Medicine University of New Mexico, Albuquerque NM-87131. John A. Shelnutt (Consultant) Distinguished Member of Technical Staff Sandia National Laboratories Albuquerque, NM 87106. TARGET AUDIENCES: Whereas the proposal defines a narrow audience of agriculturalists working on Pierce's Disease and regulatory authorities chartered with oversight of transgenic technologies, the impact of this project, when fully realized, extends the target audience to: 1) Entomologists with interest in control of vector-borne disease 2) Agriculturalists in several international communities (Europe, Asia, Africa and North America) who are developing filed-based strategies to enhance output 3) Public health officials tasked with development of novel methods for control of vector-borne human diseases 4) Biotechnologists with a focus on environmental applications 5) Medical personnel, such as infectious disease specialists, with particular focus on vector-borne disease. 6)Global health officials with interest in global food security and agricultural output (i.e. the Gates Foundation). PROJECT MODIFICATIONS: Whereas the initial proposal describes a paratransgenic method involving Alcaligenes species, concerns remained about the potential adverse impact on human health, especially in immunocompromised individuals. Recent finding form the Miller Lab suggest that P. agglomerans plays a symbiotic role in H. vitripennis. Since the Pantoea strain E-325 has been approved for environmental dissemination and poses no threat to human and animal populations, we elected to move forward with this organism instead of the Alcaligenes species described in the original proposal. We do not believe that this constitutes a major change or scientific departure from our original proposal or intended project. Furthermore, we have developed robust molecular tools for the transformation of Pantoea strains, and have been able to make significant progress with the stated aims of this proposal.

Impacts
Our current work in microencapsulation of genetically modified bacteria for use in paratransgenic insect control has yielded several very promising results: 1) We have successfully developed an alginate-based calcium/barium hybrid microparticle with a Ca2+-ALG core and Ba2+-ALG shell that successfully contains "payload" microbes in liquid solution while maintaining microbe viability until the particles are dissolved. 2) We have successfully demonstrated "tuning" the particle release profiles, wherein microbes can diffuse from the particle at variable rates depending on cross-linker composition (Ba2+:Cal2+). 3) We have successfully encapsulated P. agglomerans and B. subtilis and have demonstrated their rescue from the microcapsule as well as enhanced viability within the capsule. 4) We have validated the premise that alginate microspheres would provide resistance to environmental insult such as ultraviolet radiation by demonstrating increased survival of encapsulated microbes when exposed to high energy UVC radiation. 5) We are currently developing a novel encapsulation formula incorporating a high-carbon dye which should further increase this UVC resistance. 6) The initial proposal aims to develop microencapsulation technology for paratransgenic control of Pierce's disease. The progress to date with encapsulated P. agglomerans advances the goal and we anticipate contained filed trials in 2012 to evaluate efficacy, both in terms of payload delivery and risk mitigation, i.e., decreased non-target spread of payload. 7) Other applications of this approach greatly increase the global impact of this project. Microencapsulation in being developed for use in desert communities through the collaboration with the BioDesert Program (European Union collaboration). Furthermore, microencapsulation is being developed to drive paratransgenic strategies directed at arthropod vectors of human disease, such as sand flies (visceral leishmaniasis) and kissing bugs (Chagas disease). Current work on the prevention of horizontal gene transfer (HGT) within the rhizosphere from our engineered microbes has yielded similarly promising results: 1) All attempts at forcing HGT (a very low probability event in nature) of our engineered DNA plasmid to Pseudomonas fluorescens and native P. agglomerans in liquid media, soil and other HGT-promoting environments have failed. This is encouraging since it suggests that the engineered DNA is unsuitable for bacterial uptake except under very, very specific laboratory conditions and thus lowers the likelihood for environmental contamination. We are currently investigating several other microbes to confirm this hypothesis. 2) Preliminary results demonstrate that P. agglomerans is viable in the earthworm gut as well as the soil. We are currently investigating whether any possible HGT occurs within these systems. 3) We are preparing studies on HGT prevention utilizing alginate microspheres, which act as physical barriers containing engineered DNA from entering the rhizosphere, thereby even further decreasing the likelihood of environmental contamination.

Publications

  • Arora, A.K., Durvasula, R., and Miller T.A. 2012. Distinguishing between two closely related strains of Xylella fastidiosa. (in prep)
  • Forshaw, A.P., Miller, T.A., Arora A.K. and Durvasula, R., 2010. Microencapsulation of engineered microbes in paratransgenic control strategies. (in prep)