Progress 10/01/09 to 09/30/12
Outputs OUTPUTS: The main activities that were generated during this study were (i), conducting experiments in which gene expression was assessed in drug-resistant and -sensitive animal-pathogenic nematodes, with focus upon proteins likely to be involved in drug resistance, and (ii), training and mentoring of one PhD-candidate student and one research associate in techniques required for conducting and analyzing the experiments and in the background biological information associated with the study. Products generated and disseminated from this study included (i) one agricultural sciences PhD student whose graduate thesis focused upon experiments conducted within this study (PhD: College of Agriculture and Life Sciences: Interdepartmental Major in Genetics), (ii) collaboration initiated between the two research groups that conducted the experiments, (iii) genetic details of 26 genes/proteins that art predicted to be involved in drug resistance; these genetic details have been deposited on-line at the U.S National Center for Biotechnology Information so they can be available to the scientific community. PARTICIPANTS: The participants on this grant included the project directors Jeffrey Beetham, Richard Martin, and Alan Robertson who designed the experiments and mentored execution and analysis of the experiments by trainees. Trainees who performed the experimental execution on the project included PhD-student Nathan Romine and support scientist Christian Bartholomay. Primary analysis of the data was by Romine, Beetham, and Martin. TARGET AUDIENCES: The target audience that was served by the project is comprised primarily of scientists working in the field of drug resistance in nematode-pathogens of agricultural animals. PROJECT MODIFICATIONS: Nothing significant to report during this reporting period.
Impacts The findings of this study resulted in a change of knowledge comprised by the elucidation of genes that are implicated to be involved in nematode resistance to drugs. There was also a major change in knowledge for the trainees and scientists in regards to skills learned and developed with which to apply new bioinformatics techniques towards the identification and characterization of drug-resistance genes. Based upon the change in knowledge about the genes, and about the techniques of bioinformatics, a change of action impact of the study is that it is shaping the approach now being followed towards further study of the biological process of drug resistance in the parasitic nematodes.
Publications
- Romine, N. (2012). Transcriptomic identification and characterization of levamisole resistance associated genes in the swine nodular worm Oesophagostomum dentatum. Graduate Thesis and Dissertation. http://lib.dr.iastate.edu/etd Romine, N., Martin, R., Beetham, J. (2013) Computational cloning of drug target genes of a non-model nematode, Oesophagostomum dentatum. BMC Genetics (pending).
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