Source: MICHIGAN STATE UNIV submitted to NRP
ARMILLARIA ROOT ROT
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
0214903
Grant No.
2008-34469-19337
Cumulative Award Amt.
(N/A)
Proposal No.
2008-04107
Multistate No.
(N/A)
Project Start Date
Sep 1, 2008
Project End Date
Aug 31, 2010
Grant Year
2008
Program Code
[TV]- Armillaria Root Rot, MI
Recipient Organization
MICHIGAN STATE UNIV
(N/A)
EAST LANSING,MI 48824
Performing Department
Plant, Soil and Microbial Science
Non Technical Summary
Michigan is first in tart cherry producing state in the US with total production of approximately 200 million pounds each year. Michigan also contributes about 10% of the national production of sweet cherry. All together, the production of tart and sweet cherries is an important part of the overall agricultural economy of Michigan. Armillaria root rot is a potentially devastating disease of cherry. Once orchards are infected with Armillaria, annual loss of trees will continue to occur until the orchard is abandoned or removed. Because Armillaria remains in the soil for many years, infected orchard sites are not suitable for the production of stone fruits. Thus, finding a long-term, sustainable solution to this disease problem is important Michigan's agricultural economy as well as in preserving land that is agriculturally productive. The orchards also add value to the economy and aesthetics of the state by promoting agro-tourism. The goal of this project is to conduct research that will develop effective and sustainable disease management tools for Armillaria root rot that can be implemented in the short and long term. A complementary goal is to understand the nature of pathogenicity in Armillaria species and use this information to develop long term control strategies that will be based on interfering with the life cycle and infection process of this pathogen. The research will be carried out using field and greenhouse evaluations of possible resistant cherry rootstocks, the testing of promising biological controls, and surveys to determine the distribution of the pathogen in cherry producing areas of Michigan. Laboratory based research will investigate aspects of the biology of the pathogen and the infection process that are relevant to long-term disease management practices.
Animal Health Component
40%
Research Effort Categories
Basic
50%
Applied
40%
Developmental
10%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
2121112100025%
2121112110250%
2121112116025%
Goals / Objectives
The long-term objective of this project is to develop cherry rootstocks with resistance to Armillaria root rot, to understand the nature of pathogenesis and resistance in this disease, and to develop management tools to reduce the risk and severity of this disease. Relatively little is known about this host-pathogen interaction and much more information on how this fungus causes disease, how resistance is expressed, and how the disease may be managed is needed. In the short term of this project, evaluation of Prunus species for resistance will be conducted as well as a continued survey for the pathogen and controlled experiments on the biological control of Armillaria. Research to evaluate factors that influence the development of rhizomorphs will be conducted. The specific objectives are to 1. Continue field, greenhouse and laboratory screening of potential cherry rootstocks, other Prunus species, and other fruit crops for resistance to Armillaria ostoyae; 2. Use the PCR-based identification tools to examine survey and evaluate selected orchards for the presence of Armillaria species; 3. Evaluate, under controlled conditions, biological control agents that have potential to slow the rate of disease development in infested cherry orchard sites; 4. Conduct research on rhizomorph biology and pathogen-produced factors that may be involved in pathogenicity, infection and virulence. As a result of this research information on the relative susceptibility of cherry and other Prunus roots stocks will become available for use by industry. The survey will provide a better picture of the extent of Armillaria infestation and aid in decision making related to orchard site selection. The biocontrol work will provide information on possible biological agents that may be useful in future management of the disease. A better understanding of the mechanisms of infection and pathogenicity will provide new insight into how disease becomes established and can provide information on what phases of disease development may be good targets for novel management approaches.
Project Methods
Various Prunus rootstocks will be tested for resistance to Armillaria root root in field and cold trials. The plant material will be inoculated with Armillaria ostoyae, the pathogen most commonly found in that cherry production region. Cherry seedlings that have been grown in tissue culture will also be inoculated for resistance assessment. The approach using seedlings allows us to assess susceptibility within three months as compared to over a year with field or cold frame assessments. The most resistant material will be propagated for future testing. Because new species of Armillaria have been found in NW Michigan orchards, several additional orchards will be examined to determine if these other species are present. We will use PCR/RFLP analysis identify Armillaria species. The use of selected actinomycetes as biocontrol agents will be carried out under greenhouse conditions to identify possible novel control measures. We will evaluate a selection of Armillaria isolates and species for factors related to pathogenesis and rhizomorphs biology. Because of the melanization of the rhizomorphs, it is likely that laccases or related phenol oxidases are induced as rhizomorphs develop. The production and expression of these enzymes by gel electrophoresis and PCR during the induction of growth of rhizomorphs in culture will be followed as a means of establishing the timing of laccase expression with the formation of rhizomorphs. Infection by Armillaria is believed to occur via penetration of root tissues by rhizomorphs. Initial penetration of the outer suberized bark has been reported as means of infection by Armillaria and enzymatic degradation of the suberized tissues is part of the early phases of penetration. Because suberin is a heteropolymer of both aromatic (lignin like) and aliphatic domains, the ability of A. ostoyae to produce enzymes such laccase and polymer degrading esterases that can aid in the degradation of suberin will be determined. Research will also be conducted on pathogen produced factors that may be involved in post-penetration pathogenicity. Using cherry seedlings produced in tissue culture, Armillaria infections will be monitored to determine if pectinases and other cell wall degrading enzymes are produced as part of colonization process.

Progress 09/01/08 to 08/31/10

Outputs
OUTPUTS: A field site with well-drained sandy soils located near the Northwest Michigan Horticultural Research Station is being used for evaluating rootstock resistance. In 2009, several orchards were sampled in the cherry producing regions in NW Michigan. Samples were taken from mature trees that had died or were dying. Interestingly, we observed several fairly young trees killed by Armillaria within two years of planting. PCR analysis of samples indicated that A. ostoyae was the only species of Armillaria isolated from the sampled orchards. Potential biocontrol agents (actinomycetes) from soil were tested and found to have little activity. A Trichoderma; was isolated from Armillaria infected cherry roots and will be evaluated for potential biocontrol activity. A field test with several Trichoderma isolates was established using young Prunus trees and A. ostoyae. The fungicide propiconazole has been reported to be inhibitory to species of Armillaria such as A. mellea. This chemistry, as two commercial formulations, was further tested against three additional isolates of A. ostoyae. Some differential sensitivity among the isolates was detected. Propiconazole is mobile in woody species; therefore, use of this compound may have value in protecting against infection. Culture filtrates, fungal hyphae and rhizomorphs were assessed for laccase production by polyacrylaminde gel electrophoresis (PAGE) analysis. Several different laccases, based on electrophoretic mobility, were detected among the Armillaria species evaluated. Extraction of laccases from culture filtrates, hyphae and rhizomorphs was successful as monitored by PAGE. Culture conditions impacted the production of laccase. Soy broth stimulated the most laccase activity as compared to standard YMPG medium. PAGE analysis suggests that soy broth may have also stimulated a second isozyme with a slightly larger mass. Addition of CuSO4 decreased activity in YMPG while adding ethylenedinitrilo tetraacetic acid (EDTA) with CuSO4 as a means of chelating the CuSO4 showed a slight increase. This is of potential interest as laccase are CuSO4 containing enzymes. The isozyme patterns of laccase from A. ostoyae culture filtrates were not the same as those seen in mycelium and rhizomorphs, and this may reflect different functions of the enzymes. Higher molecular weight laccases were detected in the mycelium and rhizomorphs in addition to those around 50kD found in culture filtrates. PARTICIPANTS: R. Hammerschmidt (PI); Janette Jacobs research staff who conducted research on biocontrol agents, fungicides and Armillaria detection; Collaborator: Eric Lizotte, IPM program specialist at NW Michigan Horticulture Station who is involved in locating orchards and assisting in sampling. TARGET AUDIENCES: Michigan cherry industry, extension educators, research plant pathologists PROJECT MODIFICATIONS: Nothing significant to report during this reporting period.

Impacts
Screening for resistance and susceptibility to Armillaria root rot will be of use in decision making when planting into known infected areas. . A survey for Armillaria in cherry producing areas was continued and verified that A. ostoyae is the predominant species. This information is important for orchard site selection and disease management Biocontrol and chemical control agents, if proven to be effective, may lead to additional management approaches. Research on mechanisms of pathogenicity and virulence will aid in development of future management methods.

Publications

  • No publications reported this period


Progress 09/01/08 to 08/31/09

Outputs
OUTPUTS: A variety Prunus and other plant materials at a field site located near the Northwest Michigan Horticultural Research Station are under evaluation for their response to Armillaria. Tissue culture evaluations of the Armillaria-Cherry interaction continued. Cherry cultivars Mazzard and Lapins were grown in tissue culture, and then inoculated with various isolates of Armillaria. After 1 - 3 months incubation, the lower portion of cherry stem was inspected visually for signs of Armillaria infection and DNA was extracted from the stem. Using PCR and Armillaria specific primers we were able to demonstrate that Armillaria had infected the lower stem and crown tissues. In the last year, several more orchards were sampled for Armillaria in the cherry producing regions of NW Michigan. Only A. ostoyae was detected. A new collection of potential biocontrol Actinomyctes were prepared from the cherry rhizosphere in several orchards in NW Michigan. These orchards also had a history of A. ostoyae infection and isolates of the pathogen were collected at the time the soil samples were taken for actinomyctes. Several of the actinomyctes reduced Armillaria growth by 50% or more and will be used for further testing. Propiconazole was tested against Armillaria species to determine the sensitivity of Michigan isolates to this fungicide. Using dose responses, an ED50 value propiconazole for A. ostoyae was determined to be 0.5 mg/L. There was some variability in sensitivity to the fungicide, but none of the isolates/species were resistant to propiconazole at the concentration used. Several pathogenic and saprophytic isolates were more tolerant of propiconazole than 0.5mg/L, suggesting that testing of isolate sensitivity may be needed if use of this type of fungicide is to be used to protect trees against infection. Armillaria culture filtrates were assessed for variation in laccase isozyme production as related to virulence. Several different laccases, based on electrophoretic mobility, were detected. Interestingly, the more saprophytic species, A. gallica, produced the most laccase in culture. Under the conditions used, A. ostoyae produced the least amount of laccase. A. gallica generally produces the greatest laccase activity. Among A. ostoyae isolates laccase activity is variable. Isolate SC1T1 exhibited strong laccase activity while other A. ostoyae isolates produced little to no laccase activity. SDS PAGE was used to analyze the protein profiles of culture filtrates. A. calvescens/ A. gallica isolates had a band at about 40 kD that is lacking in A. ostoyae and A. mellea isolates. This may represent the laccase produced under saprophytic growth. Armillaria isolates were grown on 3% malt extract agar, pH 7.0, containing bromophenol blue as a pH indicator to test for acid production. Thirty-four isolates representing all four species of Armillaria in our collection were tested. Media acidification only occurred where rhizomorphs were produced. This result suggests that the production of rhizomorphs may be associated with the production of organic acids that may be involved in pathogenesis or growth of the rhizomorphs through soil. PARTICIPANTS: R. Hammerschmidt (PI); Samantha Hollosy, technical research support staff who conducted research on biocontrol agents, fungicides and Armillaria detection; Collaborator: Eric Lizotte, IPM program specialist at NW Michigan Horticulture Station who is involved in locating orchards and assisting in sampling. TARGET AUDIENCES: Michigan cherry industry, extension educators, research plant pathologists PROJECT MODIFICATIONS: Nothing significant to report during this reporting period.

Impacts
A test for infection using tissue grown seedlings was used to evaluate infection and host resistance. This test has value in screening as well as developing a tool for studying the interaction of Armillaria with cherry. A survey for Armillaria in cherry producing areas was continued and verified that A. ostoyae is the predominant species. This information is important for orchard site selection and disease management. Actinomycetes that are antagonistic to Armillaria were isolated from cherry orchards; these bacteria may be of use in future biological control of Armillaria root rot. Research on mechanisms of pathogenicity and virulence will aid in development of future management methods.

Publications

  • No publications reported this period