Source: UNIV OF WISCONSIN submitted to
DEVELOPMENT OF POTATO VARIETIES RESISTANT TO LATE BLIGHT
Sponsoring Institution
State Agricultural Experiment Station
Project Status
TERMINATED
Funding Source
Reporting Frequency
Annual
Accession No.
0207691
Grant No.
(N/A)
Project No.
WIS0M221
Proposal No.
(N/A)
Multistate No.
(N/A)
Program Code
(N/A)
Project Start Date
Jul 1, 2006
Project End Date
Jun 30, 2008
Grant Year
(N/A)
Project Director
Palta, J.
Recipient Organization
UNIV OF WISCONSIN
21 N PARK ST STE 6401
MADISON,WI 53715-1218
Performing Department
HORTICULTURE
Non Technical Summary
Late Blight of Potato, a disease caused by the oomycete pathogen Phytophthora infestans is one of the most devastating diseases of potato worldwide. None of the potato cultivars currently grown in the United States have adequate resistance to late blight. Every year potato growers in Wisconsin spend $4-8 million in fungicides as an insurance against losses due to potato late blight infections. In addition, farmers spend $4 million to apply these fungicides. In the U.S., $70-140 is spent in fungicide to control late blight. Fungicides are applied irrespective of the incidence or the severity of this disease. This is because, once the late blight appears it is too late to contain or control it. Utilization of potato varieties resistant to late blight is the most cost-effective and environmentally sound method to controlling this disease. No potato cultivar grown in the U.S. has an adequate level of resistance to late blight. Recently, resistance to the late blight pathogen has been discovered in Solanum bulbocastanum, a species that can confer genes to cultivated potato for resistance to all known races of the late blight pathogen. The development of this type of resistance is the main focus of this project aimed to produced a first wave of breeding potato varieties with resistance to the late blight pathogen.
Animal Health Component
(N/A)
Research Effort Categories
Basic
25%
Applied
50%
Developmental
25%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
2011310108015%
2021310108010%
2121310108075%
Goals / Objectives
The objectives of this project are: 1) To produce backcross progenies by crossing available lines that carry the RB genes with cultivated types. 2) Precise screening of backcross progenies for resistance to late blight via marker assisted selection and lines with desired agronomic traits (yield, grade, fresh market or processing) 3) To incorporate additional sources of late blight resistance using wild potato species from the US Potato Gene Bank at Sturgeon Bay to ensure durable resistance to different races of late blight organism.
Project Methods
Currently, more than 800 lines derived from the initial somatic hybrid of S. tuberosum x S. bulbocastanum are available. These lines have been backcrossed three times to Solanum tuberosum, the cultivated potato, are being tested for the presence of the RB gene that confers resistance to all races of P.infestans. Objective 1 and 2: 1 Once the RB gene is identified with the use of polymerase chain reaction (PCR) markers, lines carrying the RB gene will be planted at the Rhinelander Agricultural Research Station and characterized for quality trait and yield potential. Lines that carry the RB gene and characterized with high yield and quality will be evaluated for resistance to the US8 genotype of P.infestans, which affect all late blight resistance genes except the RB gene. 2 Selected lines will be crossed for the fourth time (BC4) to commercial varieties to incorporate more quality and yield traits. The UW-Breeding program will be responsible for this, and will receive collaboration from Kitrina Carlsson at UW-Stout. 3 Most exceptional BC3 lines, that carry the RB gene, superior quality and yield will be multiplied to be included in replicated trials carried out at the Rhinelander and Hancock Agricultural Research Station in the summer of 2008. 4 BC4 seed will be planted and characterized for the presence of the RB gene with the use of PCR markers (Colton et al., 2006). Mini-tubers from lines carrying the RB gene will be selected; from each selected plant one mini-tuber will be used for late blight testing by PI Terese Barta at UW-Stevens Point and other to be planted as single hill at the Rhinelander Agricultural Research Station in the summer of 2008. Objective 3: Dr. John Bamberg at Sturgeon Bay (US Gene Bank) has identified two wild species with extreme resistance to late blight fungus. These are S. macrodontum and S. okadae. Over the past few years he has created hybrids of these species with cultivated potato S. tuberosum. These materials are now available for producing elite lines with independent sources of resistance to late blight. We will pursue this work by obtaining these hybrids from Dr. Bamberg and incorporating them into our breeding program. In addition, we will continue to screen additional wild species to look for other sources of resistance to late blight. This is important because the late blight fungus has many races and the current resistant lines available from the hybrids obtained with S. bulbocastanum may not have the resistance to all the races of the pathogen. Additionally this pathogen is known to mutate and change, thus, in order to ensure durable resistance we need to incorporate more sources of resistance in the advanced cultivars. A set of wild potato species will be identified by the US Potato GeneBank (Collaboration of J. Bamberg) and evaluated to determine whether other species may be used as donors of the RB genes besides other known traits.

Progress 07/01/06 to 06/30/08

Outputs
OUTPUTS: Utilization of potato varieties resistant to late blight is the most cost-effective and environmentally sound method to controlling this disease. Resistant varieties minimize crop injuries and the environmental impact of fungicide applications. Full immunity has been derived from at least 11 resistance (R) genes derived from the wild species Solanum demissum and S. andigena. These R genes have been incorporated into numerous potato varieties. However, this resistance breaks down in the presence of a different race of this oomycete. Moreover, at least one race of P. infestans, represented by the US8 strain, the most widely distributed in the US can overcome all these 11 R genes. In a study of 147 cultivars and breeding lines evaluated against the US8 genotype of P. infestans, two thirds classified as very susceptible. Thus, no potato cultivar grown in the U.S. has an adequate level of resistance to late blight. Recently, resistance to the US8 genotype was discovered in S. bulbocastanum, conferring resistance to all known races of the late blight pathogen. The development of varieties with durable, broad scope resistance was the main focus of this project. In 2007 several studies were undertaken: 1. Marker Assisted Selection for Resistance to Late Blight: In 2007, 276 clones that were previously confirmed in Dr. Jiming Jiang's laboratory to carry RB late blight resistance gene were planted in the field and selected for adaptation, maturity and tuber traits. A small percentage of these lines are targeted for additional evaluations for use as parents and potential variety development. 2. Selection of Progenies for Late Blight Resistance: In 2007, 167 clones were field evaluated for adaptation. These clones were screened by detached leaf assays in collaboration with Dr. Terese Barta (UW-Stevens Point) under controlled conditions. We submitted 160 early stage lines carrying different late blight sources of resistance to the Oregon breeding program for unreplicated evaluations (4 hills). In addition, 40 advanced lines were evaluated for late blight resistance in collaboration with this breeding program. Incidence of late blight in the field is highly dependent on weather conditions. Therefore, to assess late blight resistance under uniformly favorable conditions, a detached leaf assay was developed and tested in 2008. For this purpose potato plants were grown in a greenhouse and excised leaves were exposed to Phytophtora infestans (strain ME9382). Leaves will be scored seven days after inoculation by estimating the percent surface area of the leaf with watersoaking or necrosis, and for the presence of sporangia. We plan to use this assay in future studies aimed at screening potato breeding lines for late blight resistance. PARTICIPANTS: Terese Barta and Felix Navarro TARGET AUDIENCES: Potato Growers, Breeders and Scientists PROJECT MODIFICATIONS: Nothing significant to report during this reporting period.

Impacts
Growers will benefit with the development and use of resistant potato cultivars due to a decrease in the cost of production due to a reduction in the use of fungicides including mancozeb, dimethomorph, cymoxanil, zoxamide, fluazinam, propamocarb, maneb, chlorothalonil, azoxystrobin, metiram, triphenyltin hydroxide, famoxadone, trifloxystrobin that are applied every year as a preventive measure irrespective of the incidence or the severity of this disease. The pre-emptive applications are done in all US potato growing areas because, once the late blight appears it is too late to contain or control it. In addition, farms and related agribusinesses will also benefit with the development and use of resistant potato cultivars by having sustainable and more secure investments and benefits through years. During the 1995 late blight epidemics that affected the US Columbia Basin, the number of fungicide applications increased from 2.5 to 10. This represented a $30 million expenses in this region alone reported in 1995 and $70-140 countrywide to control late blight reported in 2003. In relation to the improvement of the quality of life, the public will benefit from the development and adoption of varieties with a broad scope of resistance to different late blight strains due to a reduction of pollution caused by the deposition of fungicides into the environment every year. In 2008, we developed an excised leaf assay to screen potato breeding lines for late blight resistance. This assay worked satisfactorily and will be used in future studies.

Publications

  • No publications reported this period


Progress 01/01/07 to 12/31/07

Outputs
OUTPUTS: Utilization of potato varieties resistant to late blight is the most cost-effective and environmentally sound method to controlling this disease. Resistant varieties minimize crop injuries and the environmental impact of fungicide applications. Full immunity has been derived from at least 11 resistance (R) genes derived from the wild species Solanum demissum and S. andigena. These R genes have been incorporated into numerous potato varieties. However, this resistance breaks down in the presence of a different race of this oomycete. Moreover, at least one race of P. infestans, represented by the US8 strain, the most widely distributed in the US can overcome all these 11 R genes. In a study of 147 cultivars and breeding lines evaluated against the US8 genotype of P. infestans, two thirds classified as very susceptible. Thus, no potato cultivar grown in the U.S. has an adequate level of resistance to late blight. Recently, resistance to the US8 genotype was discovered in S. bulbocastanum, conferring resistance to all known races of the late blight pathogen. The development of varieties with durable, broad scope resistance is main focus of this project. The specific objectives of this project are: i. to produce backcross progenies by crossing available lines with RB genes against cultivated types. ii. to precisely screen backcross progenies for resistance to late blight combining marker assisted selection with desired agronomic and quality traits (yield, grade, fresh market or processing). iii. to screen selected potato accessions from the US Potato Gene Bank at Sturgeon Bay for the RB and other genes as possible alternate sources of resistance. iv. to develop a collaborative effort between UW-Madison, UW-Stevens Point and US Potato Gene Bank at Sturgeon Bay. In 2007 several studies were undertaken: 1. Marker Assisted Selection for Resistance to Late Blight: In 2007, 276 clones that were previously confirmed in Dr. Jiming Jiang's laboratory to carry RB late blight resistance gene were planted in the field and selected for adaptation, maturity and tuber traits. A small percentage of these lines are targeted for additional evaluations for use as parents and potential variety development. 2. Selection of Progenies for Late Blight Resistance: In 2007, 167 clones were field evaluated for adaptation. These clones were screened by detached leaf assays in collaboration with Dr. Terese Barta (UW-Stevens Point) under controlled conditions. We submitted 160 early stage lines carrying different late blight sources of resistance to the Oregon breeding program for unreplicated evaluations (4 hills). In addition, 40 advanced lines were evaluated for late blight resistance in collaboration with this breeding program. TARGET AUDIENCES: Potato Growers, Breeders and Scientists.

Impacts
Growers will benefit with the development and use of resistant potato cultivars due to a decrease in the cost of production due to a reduction in the use of fungicides including mancozeb, dimethomorph, cymoxanil, zoxamide, fluazinam, propamocarb, maneb, chlorothalonil, azoxystrobin, metiram, triphenyltin hydroxide, famoxadone, trifloxystrobin that are applied every year as a preventive measure irrespective of the incidence or the severity of this disease. The pre-emptive applications are done in all US potato growing areas because, once the late blight appears it is too late to contain or control it. In addition, farms and related agribusinesses will also benefit with the development and use of resistant potato cultivars by having sustainable and more secure investments and benefits through years. During the 1995 late blight epidemics that affected the US Columbia Basin, the number of fungicide applications increased from 2.5 to 10. This represented a $30 million expenses in this region alone reported in 1995 and $70-140 countrywide to control late blight reported in 2003. In relation to the improvement of the quality of life, the public will benefit from the development and adoption of varieties with a broad scope of resistance to different late blight strains due to a reduction of pollution caused by the deposition of fungicides into the environment every year.

Publications

  • No publication yet, the project started in July 2006


Progress 01/01/06 to 12/31/06

Outputs
Utilization of potato varieties resistant to late blight is the most cost-effective and environmentally sound method to controlling this disease. Resistant varieties minimize crop injuries and the environmental impact of fungicide applications. Full immunity has been derived from at least 11 resistance (R) genes derived from the wild species Solanum demissum and S. andigena. These R genes have been incorporated into numerous potato varieties. However, this resistance breaks down in the presence of a different race of this oomycete. Moreover, at least one race of P. infestans, represented by the US8 strain, the most widely distributed in the US can overcome all these 11 R genes. In a study of 147 cultivars and breeding lines evaluated against the US8 genotype of P. infestans, two thirds classified as very susceptible. Thus, no potato cultivar grown in the U.S. has an adequate level of resistance to late blight. Recently, resistance to the US8 genotype was discovered in S. bulbocastanum, conferring resistance to all known races of the late blight pathogen. The development of varieties with durable, broad scope resistance is main focus of this project. The specific objectives of this project are: i. to produce backcross progenies by crossing available lines with RB genes against cultivated types. ii. to precisely screen backcross progenies for resistance to late blight combining marker assisted selection with desired agronomic and quality traits (yield, grade, fresh market or processing). iii. to screen selected potato accessions from the US Potato Gene Bank at Sturgeon Bay for the RB and other genes as possible alternate sources of resistance. iv. to develop a collaborative effort between UW-Madison, UW-Stevens Point and US Potato Gene Bank at Sturgeon Bay. Specifically, for 2006 we: 1). Increased and characterized 276 lines carrying the RB gene responsible for late blight resistance and characterized these lines for quality traits and yield potential. We have now seed available of these lines that will be used to corroborate resistance at the plant and tuber levels. 2). In collaboration with T. Barta, we developed a detached leaf assay for evaluating resistance to the US8 genotype of P.infestans. In this assay we were evaluating the pathogenicity and virulence of four strains of this organism. This assay is giving satisfactory result. 3. We are in the process of selecting breeding lines that will be backcrossed for the fourth time (BC4) to commercial varieties to incorporate more quality and yield traits. Most exceptional BC3 lines that carry the RB gene, superior quality and yield will be multiplied to be included in replicated trials. 4). In collaboration with J. Bamberg, we have identified S. microdontum and S. okadae as other sources of late blight resistance in wild potatoes. These species have been crossed with diploid S. tuberosum types and tubers from these are now available for use in our breeding program.

Impacts
Growers will benefit with the development and use of resistant potato cultivars due to a decrease in the cost of production due to a reduction in the use of fungicides including mancozeb, dimethomorph, cymoxanil, zoxamide, fluazinam, propamocarb, maneb, chlorothalonil, azoxystrobin, metiram, triphenyltin hydroxide, famoxadone, trifloxystrobin that are applied every year as a preventive measure irrespective of the incidence or the severity of this disease. The pre-emptive applications are done in all US potato growing areas because, once the late blight appears it is too late to contain or control it. In addition, farms and related agribusinesses will also benefit with the development and use of resistant potato cultivars by having sustainable and more secure investments and benefits through years. During the 1995 late blight epidemics that affected the US Columbia Basin, the number of fungicide applications increased from 2.5 to 10. This represented a $30 million expenses in this region alone reported in 1995 and $70-140 countrywide to control late blight reported in 2003. In relation to the improvement of the quality of life, the public will benefit from the development and adoption of varieties with a broad scope of resistance to different late blight strains due to a reduction of pollution caused by the deposition of fungicides into the environment every year.

Publications

  • No publication yet, the project started in July 2006