Source: PRAIRIE VIEW A&M UNIVERSITY submitted to
UTILIZATION, CHARACTERIZATION AND PRESERVATION OF GOAT GENETIC RESOURCES II
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
TERMINATED
Funding Source
Reporting Frequency
Annual
Accession No.
0204895
Grant No.
2005-38814-16394
Project No.
TEXX-DZAMUKA
Proposal No.
2005-03679
Multistate No.
(N/A)
Program Code
EQ
Project Start Date
Sep 15, 2005
Project End Date
Sep 14, 2010
Grant Year
2005
Project Director
Dzakuma, J. M.
Recipient Organization
PRAIRIE VIEW A&M UNIVERSITY
P.O. Box 519, MS 2001
PRAIRIE VIEW,TX 77446
Performing Department
RESEARCH CENTERS
Non Technical Summary
Population structure within goat breeds in the USA is often not well defined. Measures of evolutionary genetic distances and molecular breed characterization will lead to informed decisions and set priorities on sampling, i.e., suggest which populations to collect for cryopreservation of semen and embryos.
Animal Health Component
(N/A)
Research Effort Categories
Basic
(N/A)
Applied
100%
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
3033820108050%
3043820104050%
Goals / Objectives
(1). To quantify genetic diversity within and among eight goat breeds located in Texas and the southeastern USA. (2). To clarify the evolutionary genetic relationships among the eight goat breeds.
Project Methods
Blood samples will be collected from 25 unrelated males from each of eight goat breeds: Boer, Spanish, Tennessee Stiff-legged (Myotonic), Nubian, Toggenburg, Angora, San Clemente and Brush Goats of the southeast. Genomic DNA will be extracted from these blood samples using a standard salt precipitation method. One goat from each breed will be selected. Two hundred (200) markers will be pre-screened on these goats. Up to 25 microsatellite markers that show strong amplification as well as allelic polymorphism will be chosen. The 25 animals of all breeds will be genotyped for these microsatellites.

Progress 09/15/05 to 09/14/10

Outputs
OUTPUTS: Our working hypothesis is caprine seminal plasma contains specific proteins that are crucial for fertility. The identification of these proteins may lead to the development of a reliable, non-invasive marker for male fertility. To test this hypothesis, semen was collected monthly from Alpine (n=4) and Boar (n=4) bucks. Scrotal circumference and sperm concentration in the ejaculate was recorded. Scrotal circumference varied throughout the year and was greatest at the start of the breeding season for Alpine and Boer sires. Concentration of sperm in the ejaculate also varied throughout the year. Highest concentrations were recorded during periods of sexual quiescence (April) in both Alpine and Boer sires. Concentration of sperm was lowest during the breeding season in November/December for both Alpine and Boer sires. Weight of the total ejaculate collected each month did not differ. Seminal plasma was separated from spermatozoa by centrifugation and protein concentrations in seminal plasma were determined. Concentrations of proteins in seminal plasma gradually increased from August until the months of October - December when concentrations peaked sharply for Alpine and Boer sires and then declined. Isoelectric focusing and SDS-PAGE were used to characterize seminal plasma protein profiles in ejaculates. Analysis revealed a complex profile of seminal plasma proteins. Major proteins were identified with approximate molecular weights of 139.0, 132.0, 96.7, 75.2, 61.0, 55.5, 41.6, 33.0, 22.0, 17.7, 16.9, 15.7 and 14.8 kDa. Of particular interest were a complex of low molecular weight (less than 20 kDa) proteins with isoelectric points between pH 4 - 7. These abundant proteins were subjected to electrospray ionisation mass spectrometry. Mascot search results indicated the sequence of the 14.8 kDa protein was similar (Score = 127) to bodhesin-2 from Capra hircus. Bodhesin-2 belongs to a new family of animal lectins called spermadhesins and constitutes one of the main protein components of seminal plasma from pigs, cattle, horses, and sheep. Identification of key seminal plasma proteins may ultimately lead to tests that will predict, at an early age, the utility of sires used in animal production systems. PARTICIPANTS: L.C. Nuti, Ph.D. and G.R.Newton, Ph.D., Prairie View A&M University and N.H. Ing, Ph.D., Texas A&M University. TARGET AUDIENCES: Identification of key seminal plasma proteins that may be involved in sperm‐oviduct binding may ultimately lead to tests that will allow limited resource farmers to predict, at an early age, the utility of goat sires used in animal production systems. PROJECT MODIFICATIONS: The original objectives of the proposal are: 1) To quantify genetic diversity within and among 15 goat breeds located in Texas and the southeastern USA., and 2) To clarify the evolutionary genetic relationships among 15 goat breeds. The original Principle Investigator left the University on 10/1/09. Permission was received to narrow the focus to two breeds of goats, Alpine (dairy) and Boer (meat) breeds. Specific goals are look for markers for male fertility that can aid in selecting genetic resources for conservation and enhancement.

Impacts
Male sub-fertility is a serious problem in many farm species. Current clinical tests have proven limited due to many other factors that are unrelated to overall fertility. The biochemical composition of seminal plasma (SP) is complex, variable between species and likely influences several important biological processes. There is emerging evidence that specific SP associate with the sperm plasma membrane and facilitate sperm binding to epithelial cells in the oviduct. This creates a sperm reservoir that may influence fertility by maintaining sperm viability and suppressing motility. It has also been suggested that the capacity of sperm to bind oviductal explants in vitro might be a useful predictor of male fertility. Therefore, identification of key SP proteins involved in sperm-oviduct binding may ultimately leads to tests that will allow limited resource farmers to predict, at an early age, the utility of goat sires used in animal production systems.

Publications

  • Rucker, D., Baker, K., Tress, U., Nuti, L.C., and Newton, G.R. 2010. Characterization of seminal plasma proteins from dairy and meat goat sires. Biol. Reprod. 83 (Suppl. 1):532.
  • Baker, K.N., Horner, S.D., Rucker, D.K., Nuti, L.C. and Newton, G.R. 2010. The relationships between somatic cell count and bacteriology on milk quality and production in dairy goats. J. Anim. Sci. 88 (Suppl. 2):W44.


Progress 09/15/07 to 09/14/08

Outputs
OUTPUTS: Major proteins were identified with approximate molecular weights of 139.0 132.0, 96.7, 75.2, 61, 55.5, 41.6, 33, 22, 17.7, 16.9, 15.7 and 14.9 kDa of particular interest were a complex of low molecular weight (<20 kDa) proteins with isoelectric points between pH 4.7. These proteins have physical characteristics that are strikingly similar to bovine seminal plasma proteins known to mediate sperm - oviduct interactions during estrus. MALI-TOF was used to identify these low molecular weight proteins. Analysis by the Protein Chemistry Laboratory at Texas A&M University is currently underway. PARTICIPANTS: Project participants include G.R. Newton and L.C. Nuti at Prairie View A&M University. They are responsible semen and tissue collections. They will conduct the proteomic analysis of seminal plasma proteins to identify potential markers for male fertility. N.H. Ing at Texas A&M University is a collaborator on the project. She is guiding the analysis on mRNA expression in sperm cells. Research Core facilities at Texas A&M University, including the Protein Chemistry Laboratory, are routinely used in these studies. Opportunities for minority student participation in research leading to the M.S. and Ph.D. degrees are provided by these studies. TARGET AUDIENCES: Scientific community and producers. PROJECT MODIFICATIONS: The original Project Director left the University on 10/1/08. The funding agency approved a change in the scope of work under a new Project Director (G.R. Newton). The original objective of the proposal indicated that "Genetic resources are the building blocks for all production systems. Conservation, maintenance, enhancement and access to these genetic resources will enable small goat producers to increase their profitability." One goal was to quantify genetic diversity within and among eight goat breeds located in Texas and the southeastern USA. Since the project was entering its fourth year in 2009, we propose to focus only on two breeds of goats, Alpine (dairy) and Boer (meat) breeds. Specifically we will look for markers for male fertility that can aid in selecting genetic resources for conservation and enhancement.

Impacts
Identification of key seminal plasma proteins that may be involved in sperm/oviduct binding may ultimately lead to tests that will allow limited resource farmers to predict, at an early age, the utility of goat sires used in animal production systems.

Publications

  • Newton, G.R., Tress, U., and Ing, N.H. 2009. Alpha(1-2)fucosyltransferase gene expression by caprine endometrial tissues obtained during the estrous cycle and early pregnancy. Biol. Reprod. 81(Suppl. 1):319.
  • Reevely, A.M., Tress, U., and Newton, G.R. 2008. Characterization of apical plasma membrane proteins carrying endometrial H-type 1 antigen. Proceedings of the Gordon Research Conference on Reproductive Tract Biology, Andover, New Hamphshire.
  • Newton, G.R., Tress, U., Nuti, L.C., Johnson, B.M. and Rucker, D. 2009. Fertility Indices for Dairy and Meat Goat Sires. Proceedings of the Association of Research Directors, Inc. 15th Biennial Research Symposium. Abstract 184.


Progress 09/15/06 to 09/14/07

Outputs
OUTPUTS: Blood has been collected from the unrelated male goats in the in situ goat population maintained at the International Goat Research Center. An appeal was also made to producers, to allow PVAMU to collect blood on their unrelated male goats. Response to the appeal has been slow. Some producers are unwilling for us to collect blood (at least 2 vials) from their flock. They have said outright "No" to our request for collection. Majority of willing producers are requesting a payment before they would allow collection. A no-cost extension was requested on this grant in order to continue the parasite selection project. Over six years of selecting for "High" and "Low" tolerance to Haemonchus, we have selected 24 animals from the "High" line (6 females and 2 males per breed) and 24 animal from the "Low" tolerance line. We would like to send this selected population to the Embryo Biotechnology Laboratory at Louisiana State University (LSU) for multiplication and subsequent collection of embryos. In the fall of 2008, these 36 females and 12 males will be mated naturally in order to increase the population base. Genomic DNA will then be purified and isolated from both offspring and parents before embryos collected on them in 2009. PARTICIPANTS: Not relevant to this project. TARGET AUDIENCES: Nothing significant to report during this reporting period. PROJECT MODIFICATIONS: Nothing significant to report during this reporting period.

Impacts
Progress to date has been slow on the project due to unforseen challenges. Therefore, no measurable impact has been determined. However, the work is continuing with modifications to the original approach.

Publications

  • Dzakuma, J.M., B.M. Johnson, N.C. Beckford, L. C. Nuti, and T. M. Craig. 2008. In situ goat conservation population and selection for parasite resistance. J. Anim. Science.
  • Dzakuma, J.M., N. C. Beckford, B. M. Johnson, E. Risch. 2008. Examination of goat production in the humid Gulf Coast of Texas. Proc. 9th Intl. Conf. On Goats. Quer taro, Mexico.


Progress 09/15/05 to 09/14/06

Outputs
An appeal was made to producers, earlier in 2007, to allow PVAMU to collect blood on their unrelated male goats. Response to the appeal has been slow but so far we have collected blood on 29 unrelated bucks including an original Angora foundation population and on Nubians and Alpines. This effort will continue until we obtain blood from 25 unrelated bucks per breed. Genomic DNA have been extracted from over 800 samples of blood that have been collected from goats in the Prairie View A&M University herd. Screening of microsatellites have been initiated to identify those that have variation within Boer, Spanish and Tennessee Stiff-legged goats. In a survey of four markers, two with at least five alleles in 40 males and heterozygosities of greater than .50 have been found These preliminary results are very encouraging.

Impacts
We may be able to obtain a minimum of 25 polymorphic microsatellite markers for use in this diversity study.

Publications

  • No publications reported this period