Source: UNIV OF HAWAII submitted to NRP
TRANSGENIC CITRUS PLANTS WITH BROAD AND DURABLE RESISTANCE TO CITRUS TRISTEZA VIRUS
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
0201277
Grant No.
2004-34399-15122
Cumulative Award Amt.
(N/A)
Proposal No.
2004-20000
Multistate No.
(N/A)
Project Start Date
Sep 15, 2004
Project End Date
Sep 14, 2007
Grant Year
2004
Program Code
[OZ]- (N/A)
Recipient Organization
UNIV OF HAWAII
3190 MAILE WAY
HONOLULU,HI 96822
Performing Department
PLANT & ENVIRONMENTAL PROTECTION SCIENCES
Non Technical Summary
Citrus tristeza virus (CTV) and its most effective vector, the brown citrus aphid (BrCA), have been present in Hawaii for over 50 years. Our first objective is to use a synthetic resistance transgene based on the coat protein gene sequence of over 100 Hawaiian and 14 other CTV strains from around the world to transform Mexican lime and evaluate its ability to induce broad resistance against CTV via post-transcriptional gene silencing. Our second objective is to use a field site and protocol to challenge putatively resistant transgenic Mexican lime plants (Citrus aurantifolia) developed and in transit from the Instituto Valenciano de Investigaciones Agrarias in Spain. These plants represent the first transgenic citrus that offer resistance to CTV in laboratory and greenhouse experiments, but have thus far been untested under field conditions.
Animal Health Component
25%
Research Effort Categories
Basic
50%
Applied
25%
Developmental
25%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
21209991101100%
Knowledge Area
212 - Pathogens and Nematodes Affecting Plants;

Subject Of Investigation
0999 - Citrus, general/other;

Field Of Science
1101 - Virology;
Goals / Objectives
1) Transform Mexican lime with a synthetic transgene designed for broad CTV resistance through post-transcriptional gene silencing. 2) Evaluate putatively resistant transgenic Mexican lime plants from Spain at our field site dedicated to testing for CTV resistance.
Project Methods
Objective 1) We propose to use two transgene configurations for development of resistant citrus. The first configuration (Transgene 1) will be a synthetic segment fused to a wild-type CP sequence similar to most Hawaiian CTV strains in an inverted repeat orientation. The common wild-type sequence would confer resistance against the majority of strains, while the synthetic segment would confer resistance against a broader range of strains. The inverted-repeat will fold upon itself to form a hairpin structure after transcription. Such structures have been shown to induce the PTGS mechanism more effectively than a single copy (sense or antisense) of the transgene (Waterhouse et al., 1998; Wang and Waterhouse, 2000; Wesley et al., 2001). For technical reasons in the cloning process, a linker region between 300 and 500 basepairs must be added between the two copies of the transgene. As the linker region sequence itself is unimportant in the resistance mechanism, we will derive it from an arbitrary region within the CTV genome that has low secondary structure or use a plant intron that will be spliced out during mRNA processing (Wesley et al., 2001). The second configuration (Transgene 2) would be a full- or nearly full-length synthetic CTV CP gene again in an inverted repeat configuration. This transgene should be effective against a broad range of CTV strains. Objective 2) We have previously obtained two secure one-acre sites at the Waimanalo Experiment Station on the island of Oahu for testing CTV-resistant citrus. Site 1 was formerly used as a citrus arboretum with 31 citrus and closely related species remaining. These trees were tested by both serological and RT-PCR assays and it was determined that several CTV genotypes currently found on the US Mainland were already present in these trees, as well as many other genotypes not thought to be on the US Mainland. These trees are heavily colonized by aphids at most times of the year and will serve as a source of viruliferous aphids for inoculation. For the previous 49 weeks we have examined natural CTV spread at Site 1 using 50 susceptible, virus-free citrus plants and estimate over 60% of these plants will be infected after one year, indicating there is heavy natural CTV infection pressure already present at the Waimanalo Experiment Station. When we test putatively resistant plant lines, we will also include virus-free, susceptible control trees for each plant line. These control trees will be challenged in an identical manner. Test and control plants will be sampled at the beginning of each experiment and every two weeks thereafter until 100% infection is achieved in the control plants. PCR and TBIA will be used to test the samples for the presence of CTV. Infected plants will have their CTV strains characterized by strain-specific PCR primers and by sequence analysis to see if one particular group of genotypes is being transmitted more readily than other genotypes. In the control plants we would expect to see several different genotypes present, indicating multiple genotypes are being transmitted.

Progress 09/15/04 to 09/14/07

Outputs
We have previously obtained seeds from 6 transgenic lines of Mexican lime that are putatively CTV-resistant from Dr. Leandro Pena at the Instituto Valenciano de Investigaciones Agrarias in Valencia, Spain. Micro-satellite analysis was used to distinguish nucellar (hemizygous) and zygotic (homozygous) seedlings in the transgenic lines and a wild-type control. A nucellar seedling from each of the six transgenic lines and the wild-type control was propagated onto sixteen C-35 citrange rootstocks and grown in the greenhouse. These grafted plants have now attained a suitable size for field evaluation. We have also received the required permits from the Hawaii Department of Agriculture and USDA-APHIS allowing the field trial to commence. We have sequenced over 100 coat protein genes from Hawaiian CTV. This, as well as coat protein gene sequence data of CTV strains from around the world obtained from GenBank, were used to generate a synthetic transgene that was ~95% identical to all of these genes. We have generated multiple lines of transgenic Mexican lime plants containing this synthetic gene in sense, anti-sense, and inverted-repeat configurations. PCR and genomic Southern analysis have confirmed the transgenic nature of these plants, and we are continuing to generate additional lines for each of the transgene configurations. Several of the transgenic lines have been propagated by bud-grafting for virus-resistance bioassays.

Impacts
Citrus tristeza virus (CTV) and its most effective vector, the brown citrus aphid (BrCA), have been present in Hawaii for over 50 years. Their relationship may be responsible for the high incidence and genetic diversity of CTV that makes Hawaii an ideal location to test citrus for CTV resistance. We have recently established a field site dedicated to test for broad CTV resistance in citrus and are conducting studies at this site using plants of susceptible citrus varieties to work out a useful testing protocol. Our first objective is to use this field site and protocol to challenge putatively resistant transgenic Mexican lime plants (Citrus aurantifolia) developed and in transit from the Instituto Valenciano de Investigaciones Agrarias in Spain. These plants represent the first transgenic citrus that offer resistance to CTV in laboratory and greenhouse experiments, but have thus far been untested under field conditions. Our second objective is to use a synthetic resistance transgene based on the coat protein gene sequence of over 100 Hawaiian and 14 other CTV strains from around the world to transform Mexican lime and evaluate its ability to induce broad resistance against CTV via post-transcriptional gene silencing. Overall, we believe that research utilizing Hawaii's diverse CTV population can better prepare citrus-producing regions where the BrCA and severe strains of CTV are, or will soon become permanently established.

Publications

  • Melzer, M. .J., Borth, W.B., Zee, F., Hilf, M.E., Garnsey, S.M., and Hu, J.S. 2006. Incidence, distribution, and diversity of Citrus tristeza virus in the Hawaiian islands. In: Proc. 16th Conf. IOCV pages 179-186.


Progress 10/01/05 to 09/30/06

Outputs
Objective 1. Evaluate putatively resistant transgenic Mexican lime plants from Spain at our field site dedicated to testing for CTV resistance. We have previously obtained seeds from 6 transgenic lines of Mexican lime that are putatively CTV-resistant from Dr. Leandro Pena at the IVIA in Valencia, Spain. Budwood from nucellar seedlings of each line (and a wild-type control) were propagated onto C-35 citrange rootstock. Sixteen grafted plants were created for each line and have now had 13-15 months of growth under greenhouse conditions, are have attained a size suitable for field evaluation. In October 2006 we received the required permits from the Hawaii Department of Agriculture and USDA-APHIS allowing the field trial to commence. Objective 2. Develop CTV-resistant citrus using the synthetic gene approach. Previously we had sequenced over 100 coat protein genes from Hawaiian CTV. This, as well as coat protein gene sequence data of CTV strains from around the world obtained from GenBank, was used to generate a synthetic transgene that was 95% identical to all of these genes. We have generated multiple lines of transgenic Mexican lime plants containing this synthetic gene in sense, anti-sense, and inverted-repeat configurations. PCR and genomic Southern analysis have confirmed the transgenic nature of these plants, and we are continuing to generate additional lines for each of the transgene configurations. Several of the transgenic lines are growing well in the greenhouse, and will be propagated by bud-grafting for virus-resistance bioassays by the end of 2006.

Impacts
Citrus tristeza virus (CTV) and its most effective vector, the brown citrus aphid (BrCA) have been present in Hawaii for at least 50 years. As no serious control strategies have ever been employed to control CTV or the BrCA, resulting in high incidence and diversity of the virus. As such, Hawaii is the ideal location to test plants putatively resistant to CTV that have been developed in Hawaii, the US mainland, or elsewhere. The development of citrus resistant to Hawaiian CTV strains would be beneficial to not only Hawaii, which has not been self-sufficient in citrus for decades, but also other citrus-producing regions in the US and abroad. Many of the strains that are found in these regions are also present in Hawaii, making plants resistant in Hawaii potentially resistant elsewhere.

Publications

  • Melzer, M. .J., Borth, W.B., Zee, F., Hilf, M.E., Garnsey, S.M., and Hu, J.S. 2006. Incidence, distribution, and diversity of Citrus tristeza virus in the Hawaiian islands. In: Proc. 16th Conf. IOCV pages 179-186.
  • Melzer, M. .J., Borth, W.B., Zee, F., Hilf, M.E., Garnsey, S.M., and Hu, J.S. 2006. Incidence and diversity of Citrus tristeza virus in the Hawaii. Phytopathology 96: 77.


Progress 10/01/04 to 09/30/05

Outputs
Objective 1. Evaluate putatively resistant transgenic Mexican lime plants from Spain at our field site dedicated to testing for CTV resistance. We have obtained seeds of 6 transgenic lines of Mexican lime from Dr. Leandro Pena at the IVIA in Valencia, Spain. These and seeds from non-transgenic controls were germinated in vitro and transferred to our greenhouse facilities. Visual evaluation and microsatellite analyses were used to discriminate between nucellar and zygotic plants. Budwood from a nucellar plant of each line (and control) was propagated onto C-35 citrange rootstock. Sixteen grafted plants were created for each line and should be ready for transplant to the field in early 2006. A set of Performance Standards requested by the Hawaii Department of Agriculture for field release of transgenic citrus were generated and accepted by the HDOA and USDA-APHIS, allowing the field trial to commence. Objective 2. Develop CTV-resistant citrus using the synthetic gene approach. Previously we had sequenced over 100 coat protein genes from Hawaiian CTV. This, as well as coat protein gene sequence data of CTV strains from around the world obtained from GenBank, was used to generate a synthetic transgene that was 95% identical to all of these genes. We have recently created transformation constructs that incorporate this synthetic transgene in various orientations: sense, antisense, and an inverted repeat that is linked together with the p23 gene from CTV. Based on information from other laboratories, we are also in the process of creating an inverted repeat of the p23 gene linked with the synthetic coat protein gene. We are currently using these constructs to transform Mexican lime.

Impacts
Citrus tristeza virus (CTV) and its most effective vector, the brown citrus aphid (BrCA) have been present in Hawaii for at least 50 years. As no serious control strategies have ever been employed to control CTV or the BrCA, resulting in high incidence and diversity of the virus. As such, Hawaii is the ideal location to test plants putatively resistant to CTV that have been developed in Hawaii, the US mainland, or elsewhere. The development of citrus resistant to Hawaiian CTV strains would be beneficial to not only Hawaii, which has not been self-sufficient in citrus for decades, but also other citrus-producing regions in the US and abroad. Many of the strains that are found in these regions are also present in Hawaii, making plants resistant in Hawaii potentially resistant elsewhere.

Publications

  • No publications reported this period


Progress 10/01/03 to 09/30/04

Outputs
Objective 1: Collect virus dissemination data at a field site dedicated to testing CTV-resistant citrus plants and develop a standard testing protocol. We have imported 7 Mexican lime lines from Dr. Leandro Pena (IVIA, Spain) that have shown various degrees of CTV resistance in greenhouse assays. These were brought in as seed in March of 2004 and have been grown to produce budwood for propagation. We estimate these plants will be ready for field testing in October 2005, although we also plan to put some seedlings into the field site in early 2005 for preliminary results. We are also working to import another, much more promising line of resistant Mexican lime from Dr. Pena, however for unknown reasons, the permitting process for this application has gone much slower at the State level, and we are still waiting for approval. Objective 2: Transform Mexican lime with a synthetic transgene designed for broad CTV resistance. Previously we had been having difficulties creating fully transgenic Mexican limes. Most of the regenerated plantlets were chimeric, with one sector transgenic, and the remainder non-transgenic. Recently, Dr. Pena visited our laboratory and gave us very helpful suggestions for creating transgenic Mexican lime and other citrus. As a result, after exposure to Agrobacterium containing a plasmid with uidA-intron, we now routinely produce explants that show heavy GUS staining, as opposed to minor spots as we had obtained previously. We are much more confident we can produce fully transformed plants with our current protocol.

Impacts
Our first objective is to exploit Hawaii diverse CTV population by creating a field site dedicated to testing for broad CTV resistance in citrus. We have established such a site at a former citrus arboretum using existing trees as well as newly planted trees that are being inoculated with CTV isolates collected from across Hawaii. Before this site becomes operational, we need to conduct preliminary studies using susceptible citrus varieties to work out a standard testing protocol. This will greatly facilitate our ability to reliably test putatively CTV-resistant citrus from Hawaii and abroad. Our second objective is to use a synthetic resistance transgene based on the coat protein gene sequence of over 100 Hawaiian and 14 other CTV strains from around the world to transform Mexican lime and evaluate its ability to induce resistance against CTV via post-transcriptional gene silencing. Overall, we feel that research utilizing Hawaii diverse CTV population can better prepare citrus-producing regions around the world where the BrCA and severe strains of CTV are, or will soon become, permanently established.

Publications

  • No publications reported this period