Source: WINSTON-SALEM STATE UNIVERSITY submitted to NRP
A MODEL SYSTEM FOR ELUCIDATION OF MECHANISMS OF INTERORGANELLE COMMUNICATION
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
0192486
Grant No.
2002-35301-12067
Cumulative Award Amt.
$75,000.00
Proposal No.
2002-01864
Multistate No.
(N/A)
Project Start Date
Sep 1, 2002
Project End Date
Aug 31, 2005
Grant Year
2002
Program Code
[52.2]- (N/A)
Recipient Organization
WINSTON-SALEM STATE UNIVERSITY
601 MARTIN LUTHER KING JR. DRIVE
WINSTON-SALEM,NC 27110
Performing Department
(N/A)
Non Technical Summary
The nucleus and the plastid are compartments in plant cells that contain DNA. Each compartment makes an important contribution to the growth and development of the whole plant. Plastid development and function depend on cooperation between two genetic compartments because genes in both the nucleus and the chloroplast produce proteins for chloroplast structure and function. Thus, the genes in the nucleus and the plastid have coevolved and adapted to produce a relationship that coordinates nuclear and plastid gene expression. In plants of the genus Oenothera, commonly known as the evening primrose, production of hybrids among member of the genus creates novel combinations of plastid and nuclear types. In some of the hybrids the cooperative relationship between the plastid and the nucleus is disrupted and leaves exhibit symptoms of abnormal chloroplast function which are most likely due to an incompatible interaction between the nucleus and the plastid. The objectives of this project include a physiological characterization of chloroplasts in plants with compatible and incompatible nucleus-plastid combinations and an evaluation of levels of plastid gene expression. The primary goal is to elucidate the mechanisms involved in the expression of incompatibility. This project will enhance the understanding of the processes involved in the communication between the nucleus and the chloroplast, processes that ultimately determine the efficiency of chloroplast function and the ability of a plant to increase productivity.
Animal Health Component
(N/A)
Research Effort Categories
Basic
100%
Applied
(N/A)
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
2012420102030%
2012420104030%
2012420108040%
Goals / Objectives
Characterize the in vivo photosynthetic activity of the plants with incompatible genome-plastome combinations. Determine whether there is a correlation between in vivo photosynthetic activity and the expression of genome-plastome incompatibility. Compare levels of chloroplast mRNA in plants with compatible and incompatible genome-plastome combinations to determine whether there is a correlation between photosynthetic activity, genome-plastome compatibility and chloroplast gene expression. Identify genes or proteins that are part of the communication pathway between the nucleus and the chloroplast. Enhance the understanding of the processes involved in the communication between the nucleus and the chloroplast, processes that ultimately determine the efficiency of the chloroplast and a plant's potential to increase productivity. Involve undergraduate students in basic research toward the goal of attracting more students toward higher education and careers in plant biology or agriculture.
Project Methods
In vivo photosynthetic rates will be measured to determine rates of light-induced CO2 uptake, the quantum yield of photosynthesis, transpiration rates and water use efficiency in the leaves of plants with compatible and incompatible genome-plastome combinations. An estimate of the relative number of light-harvesting chlorophyll proteins in photosynthetic membranes can be obtained from the kinetics of the rate of photosynthesis versus light intensity. If there is a quantitative difference in the quantity of the chlorophyll proteins in plants with compatible and incompatible genome-plastome combinations, then there should be a difference in the light-saturation curves for photosynthesis and in the relative abundance of chlorophyll protein levels. Chloroplast membrane proteins from plants with compatible and incompatible genome-plastome combinations will be isolated, fractionated by electrophoresis, blotted (Western blot) and probed with antisera raised against polypeptides of the chlorophyll protein complexes. Quantitative differences in the levels of chlorophyll binding polypeptides would support the hypothesis that plants with incompatible genome-plastome combinations have altered levels of chlorophyll proteins. The levels of chloroplast gene expression will be determined by examining levels of mRNA over the course of development. RNA isolated from plants with bleached, variegated and fully green leaves will be analyzed by hybridization of Northern blots with chloroplast DNA probes. Any observed differences in mRNA levels will identify the chloroplast genes whose level of expression is affected when a plastome is combined with an incompatible nuclear genome. To detect very small differences in RNA levels, a quantitative PCR assay will be developed to compare levels of gene expression in plants with compatible and incompatible genome-plastome combinations.

Progress 10/01/02 to 09/30/03

Outputs
The main objective of this project is to determine whether there are correlations between photosynthesis, chloroplast mRNA levels and the expression of nuclear genome- plastid genome incompatibility. In initial measurements, the rate of photosynthesis in attached leaves was low. One objective of this project involves the characterization of leaf photosynthesis, including measuring the rate of the light saturation of photosynthesis to estimate relative chlorophyll antenna sizes. In order to determine optimal conditions for measuring photosynthetic rates, plants were grown under increasing light intensities while monitoring the photosynthetic rate. The characterization of RNA levels requires a reliable method of RNA extraction from plant tissues. Of the many methods available, total RNA extracted from Oenothera leaves using two commercially available kits showed that the yield (per gram fresh weight of tissue) was lower than the yield of RNA from spinach leaves. Further, there was variation in the yield of RNA among Oenothera hybrids with different nuclear genome-plastid genome combinations. In spite of the low yield the quality of the Oenothera leaf RNA compared favorably to spinach leaf RNA. The pattern of ribosomal RNA visible on agarose gels showed no evidence of degradation of either the spinach or Oenothera RNA. The optimization of the conditions for plant growth and identification of reliable methods for isolation of RNA ensures the validity of subsequent analyses.

Impacts
This project would enhance the understanding of the processes involved in the communication between the nucleus and the chloroplast, processes that ultimately determine the efficiency of the chloroplast and the ability of a plant to increase productivity. The identification of chloroplast genes in Oenothera that are potential targets of a signal transduction pathway between the chloroplast and the nucleus may assist in the identification of homologous pathways in other plants. It should be possible to transfer the information obtained from Oenothera toward elucidation of similar pathways in crop plants.

Publications

  • No publications reported this period