Source: OREGON STATE UNIVERSITY submitted to NRP
GENE FLOW AND HYBRIDIZATION BETWEEN JOINTED GOATGRASS (AEGILOPS CYLINDRICA HOST) AND WHEAT(TRITICUM AESTIVUM L.)
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
0187196
Grant No.
2001-35320-09918
Cumulative Award Amt.
(N/A)
Proposal No.
2000-00843
Multistate No.
(N/A)
Project Start Date
Nov 15, 2000
Project End Date
Nov 14, 2004
Grant Year
2001
Program Code
[(N/A)]- (N/A)
Recipient Organization
OREGON STATE UNIVERSITY
(N/A)
CORVALLIS,OR 97331
Performing Department
CROP AND SOIL SCIENCE
Non Technical Summary
Using the tools of molecular genetics, this research takes the essential first steps in understanding the nature of hybridization between wheat and jointed goatgrass. Evidence produced by this work will help assess the extent to which hybridization contributes to the jointed goatgrass weed problem. It also will provide the information essential for future risk assessments of gene flow from transgenic wheat to jointed goatgrass.
Animal Health Component
20%
Research Effort Categories
Basic
80%
Applied
20%
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
2021543107010%
2021543108015%
2022300107010%
2022300114015%
2131543107010%
2131543108015%
2132300107010%
2132300108015%
Goals / Objectives
(1) Determine the genetic diversity of jointed goatgrass across its geographic distributions and in natural weed populations infesting winter wheat fields. (2) Determine the population structure and parentage of fertile hybrids between jointed goatgrass and wheat. (3) Determine the direction and nature of gene flow in hybridization events between jointed goatgrass and wheat.
Project Methods
DNA will be obtained from young leaf material and isolated following standard laboratory protocols, following Hoisington, Khairallah & Gonzalez de-Leon (1994) for nuclear DNA and Doyle & Doyle (1987) for cpDNA. AFLP methodology will follow standard procedure as described in Heun et al. (1997). (1) Digestion of genomic DNA with restriction enzymes; (2) Ligation of PCR adapters to the digested DNA; (3) Preselective amplification by PCR with a preselective amplification primer; (4) Selective amplification with the primer adapter pairs; (5) Gel electrophoresis of labeled fragments on an acrylamide sequencing gel; (6) Scoring AFLP profiles on the basis of presence versus absence of AFLP bands.

Progress 11/15/00 to 11/14/04

Outputs
In order to gain an understanding of factors governing gene flow, 413 BC1 seeds obtained from 127 wheat-jointed goatgrass hybrids were evaluated for their parentage using chloroplast and nuclear microsatellite markers. The hybrids and BC1 seeds were naturally produced under field conditions. The parentage of the F1 generation was deduced from its BC1 progeny. Of the 127 hybrids evaluated, 109 (85.83%) had jointed goatgrass (F1J), while the remaining 18 F1 plants (14.17%) had wheat (F1W) as their female parent. Of the 413 BC1 plants analyzed, 358 (86.68%) had wheat (BC1W) and 24 (6.29%) had jointed goatgrass (BC1J) as the recurrent male parent. The male parentage of 31 BC1 (7.51%) plants could not be determined possiblity due to meiotically restituted gametes in their production. Aegilops cylindrica (2n=4x=28; genome CCDD) is an allotetraploid formed by hybridization between the diploid species Ae. tauschii (2n=2x=14; genome DD) and Ae. markgrafii (2n=2x=14; genome CC). Previous research suggested that Ae. tauschii was the sole maternal parent in the formation of Ae. cylindrica. However, our analysis of an array of Ae. cylindrica accessions and its progenitors with 20 chloroplast microsatellite markers suggests that one Ae. cylindrica accession, TK 116 (PI 486249), has cytoplasm derived from Ae. markgrafii rather than Ae. tauschii. Thus, our analyses indicate that Ae. cylindrica has two types of cytoplasm originating from each of its diploid ancestors. Genetic diversity of accessions of 6 species, largely consisting of jointed goatgrass (Aegilops cylindrica; 174) were screened with 20 wheat chloroplast SSRs (Simple Sequence Repeats). The chloroplast SSR data were used to generate a tree showing genetic relatedness among the 192 accessions. Six species grouped according to their known cytoplasmic types. Two types of cytoplasm, C-type and D-type, were observed in jointed goatgrass. Plasmon types C and D were found for 86.32% and 6.89% of jointed goatgrass accessions, respectively. The remaining 6.79% of the jointed goatgrass accessions were heterogeneous. The chloroplast SSR analysis also helped to identify key diagnostic markers, WCt-3, WCt-11 and WCt-24. These markers differentiate between plasmon types of wheat and jointed goatgrass (B, C, D and D2). These markers were used determine the female parent of the jointed goatgrass-wheat hybrids. The 192 accessions were also screened with 23 nuclear SSR markers. Genetic diversity analysis suggested low diversity in jointed goatgrass compared to its progenitors Ae. tauschii and Ae. markgrafii. Diversity of jointed goatgrass accessions collected in the USA was comparable with those collected from its native area of distribution. The accessions of Ae. cylindrica collected from native locations were interspersed with the accessions collected from USA. However, some clusters purely consisted of accessions from the USA or native locations. Among collections made in USA, a few genotypes collected in the Pacific Northwest formed unique clusters as compared to those collected in the Great Plains, suggesting some of the accessions of Pacific Northwest may have been introduced independently.

Impacts
Results of this study will help us understand the formation of jointed goatgrass by wheat hybrids under field conditions and the role they may play in the weed problem. It is essential that we understand what is happening in the field before we can predict what may happen when herbicide-resistant wheat is introduced into the system.

Publications

  • Cremieux, L., L.A. Morrison, R.S. Zemetra, and C.A. Mallory-Smith. 2001. Seed protein and chromosome number analyses of experimental wheat x jointed goatgrass (Aegilops cylindrica Host) hybrid lines. Weed Sci. Soc. Am. Abstr. p. 127.
  • Gandhi, Harish T., I. Vales, C. Watson, R.S. Zemetra, C.A. Mallory-Smith, and O. Riera-Lizarazu. 2002. Investigations on the nature and source of the cytoplasm in the TK-116 accession of jointed goatgrass (Aegilops cylindrica). Proc. West. Soc. Weed Sci. p. 7.
  • Zemetra, R.S., C.A. Mallory-Smith, J. Hansen, Z. Wang, J. Snyder, A. Hang, L. Kroiss, O. Riera-Lizarazu, and I. Vales. 2002. The evolution of a biological risk program: Gene flow between wheat (Triticum aestivum L.) and jointed goatgrass (Aegilops cylindrica Host). Scientific Methods Workshop: Ecological and Agronomic Consequences of Gene Flow from Transgenic Crops to Wild Relatives. 150-159.
  • Morrison, L.A., O. Riera-Lizarazu, M.I. Vales, L. Cremieux, R.S. Zemetra, J. Hansen, and C.Mallory-Smith. 2002. Genetic diversity and gene flow in the crop-weed complex of wheat (Triticum aestivum L.) and jointed goatgrass (Aegilops cylindrica Host). Proc. 4th Intl. Triticeae Symp. pp. 125-130.
  • Riera-Lizarazu, O., M.I. Vales, L.A. Morrison, R.Z. Zemetra, D. Morishita, J. Hansen, and C.A. Mallory-Smith. 2002. Gene flow and hybridization between wheat (Triticum aestivum) and its wild weedy relative jointed goatgrass (Aegilops cylindrica). Proc. 4th Intl. Triticeae Symp. pp. 201-205.
  • Zemetra, R.S., C.A. Mallory-Smith, J. Hansen, Z. Wang, J. Snyder, A. Hang, L. Kroiss, O. Riera-Lizarazu, and I. Vales. 2002. The evolution of a biological risk program: gene flow between wheat (Triticum aestivum L.) and jointed goatgrass (Aegilops cylindrica Host). Scientific Methods Workshop: Ecological and Agronomic Consequences of Gene Flow from Transgenic Crops to Wild Relatives. OH St. Univ, Columbus, Ohio. pp. 178-187.
  • Morrison, L.A., L.C. Cremieux, and C.A. Mallory-Smith. 2002. Infestations of jointed goatgrass (Aegilops cylindrica) and its hybrids with wheat (Triticum aestivum) in Oregon. Weed Sci. 50:737-747.
  • Zemetra, R.S., C.A. Mallory-Smith, J.L. Hanson, Z. Wang J. Snyder, A. Hand, and L.A. Morrison. 2001. Determining the potential for gene flow between wheat and jointed goatgrass (Aegilops cylindrica). Weed Sci. Soc. Am. Abstr. p. 56.


Progress 01/01/03 to 12/31/03

Outputs
Screening of 192 accessions of 6 species, largely consisting of jointed goatgrass (174), with 20 wheat chloroplast SSRs (Simple Sequence Repeats) markers was completed. The chloroplast SSR data were used to generate a tree showing genetic relatedness among the 192 accessions. The tree suggests that there are two main types of cytoplasm in jointed goatgrass. The plasmon type C and plasmon type D. However, the data indicate that at the population level, plasmon type D (86.32 %) is more common than plasmon type C (6.89 %). From chloroplast SSR analysis, we could identify key diagonistic markers to help identify the maternal parent in the jointed goatgrass by wheat hybrids. The 192 accessions of the 6 species were also screened with 21 nuclear SSR markers. Our preliminary analysis suggests that more markers are needed to distinguish the taxons under study. We are currently in the process of adding extra markers. In a second study, more than 450 BC1 plants are being analyzed to determine their parentage. Three key diagnostic chloroplast SSR markers were used to screen these BC1 plants. Our preliminary analysis suggests that 80-84% of the BC1 plants have jointed goatgrass as a female parent in the production of jointed goatgrass-wheat hybrid plants. These BC1 plants were also screened with four nuclear SSR markers. The four markers were able to identify the male parent for 76% of BC1 plants. Preliminary analysis using four nuclear markers suggests that wheat and jointed goatgrass pollinated 70% and 6% of BC1s, respectively, while parentage of the remaining 24% BC1 plants could not be determined.

Impacts
Results of this study will help us understand the formation of jointed goatgrass by wheat hybrids under field conditions and the role they may play in the weed problem. It is essential that we understand what is happening in the field before we can predict what may happen when herbicide-resistant wheat is introduced into the system.

Publications

  • No publications reported this period


Progress 01/01/02 to 12/31/02

Outputs
Thus far, 174 accessions of jointed goatgrass have been screened with 21 nuclear and 20 chloroplast simple sequence repeat (SSR) markers. The preliminary analysis of the chloroplast data indicates that there are two main types of cytoplasm in jointed goatgrass. The nuclear SSR marker data are in the process of being analyzed. DNA has been extracted from BC1 plants (434 individuals) that were produced from seed on hybrids between wheat and jointed goatgrass. Chloroplast markers will be used to determine the initial crosses that produced the F1. This information is needed in order to understand the hybridizaton dynamics under field conditions and the direction that genes may be transferred during hybridization.

Impacts
Results of this study will help us understand the formation of jointed goatgrass by wheat hybrids under field conditions and the role they may play in the weed problem. It is essential that we understand what is happening in the field before we can predict what may happen when herbicide-resistant wheat is introduced into the system.

Publications

  • Morrison, L.A., O. Riera-Lizarazu, L. Cremieux, and C. A. Mallory-Smith. 2002. Jointed Goatgrass (Aegilops cylindrica Host) x Wheat (Triticum aestivum L.) Hybrids: Hybridization Dynamics in Oregon Wheat Fields. Crop Sci. 42:1863-1872.


Progress 01/01/01 to 12/31/01

Outputs
High molecular glutenin analysis was used to determine parentage of wheat by jointed goatgrass hybrids present in Oregon wheat fields. In addition, jointed goatgrass accessions representing the range of variation in its worldwide distribution also were included in this study. In the Oregon jointed goatgrass accessions, the seed protein analysis identified F1 hybrid seed that was formed at a rate of 0 to 8% on a per field basis. The HMW glutenin patterns in the backcross seed threshed from Oregon hybrids showed a higher proportion of seeds formed from pollination by wheat than by jointed goatgrass. Analysis of the roots for remains of the maternal seed or spikelet indicated that most hybrid plants were of the F1 generation and that either jointed goatgrass or wheat could be the female parent. These analyses suggested a hybridization dynamics in which jointed goatgrass serves as the predominant F1 female parent and wheat as the predominant backcross male parent. Development of introgressed jointed goatgrass forms carrying wheat genes would be dependent on the presence of a continuous hybrid zone located near or within a persistent jointed goatgrass population. We have begun initial screening of molecular markers to be used to determine the genetic diversity of jointed goatgrass.

Impacts
Results of this study will help us understand the formation of jointed goatgrass by wheat hybrids under field conditions and the role they may play in the weed problem. It is essential that we understand what is happening in the field before we can predict what may happen when herbicide-resistant wheat is introduced into the system.

Publications

  • Morrison, L.A., O. Riera-Lizarazu, L. Cremieux, and C. A. Mallory-Smith. 2002. Jointed Goatgrass (Aegilops cylindrica Host) x Wheat (Triticum aestivum L.) Hybrids: Hybridization Dynamics in Oregon Wheat Fields. Crop Sci. (in press)