Source: CLEMSON UNIVERSITY submitted to NRP
ADVANCED METHODS TO SUSTAIN BIOLOGICAL CONTROLS FOR INTEGRATED TURFGRASS DISEASE MANAGEMENT IN THE URBAN LANDSCAPE
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
ACTIVE
Funding Source
Reporting Frequency
Annual
Accession No.
1031104
Grant No.
2023-70006-40655
Cumulative Award Amt.
$308,615.00
Proposal No.
2023-02995
Multistate No.
(N/A)
Project Start Date
Sep 1, 2023
Project End Date
Aug 31, 2025
Grant Year
2023
Program Code
[ARDP]- Applied Research and Development Program
Recipient Organization
CLEMSON UNIVERSITY
(N/A)
CLEMSON,SC 29634
Performing Department
(N/A)
Non Technical Summary
The goal of this project is to enhance efficacy of biocontrol tactics for pesticide-free and integrated pest management (i.e., IPM) through research to understand factors which influence the establishment and persistence of introduced biocontrol antagonists applied as biofungicides to lawns/athletic fields. Results will support turfgrass disease IPM recommendations for sustainable home and school communities. This project is closely aligned with CPPM Program focus areas (Plant Protection Tactics and Tools & IPM for sustainable communities) to help the program meet its goals of improved IPM practices, reduced human health and environmental risks. Multiple greenhouse and field studies will be conducted in CT and SC to identify application strategies and cultural practices turfgrass managers can implement to enhance biofungicide efficacy. Population dynamics of introduced biocontrol antagonists applied under various cultural practices will be quantified using DNA based methods. Efficacy of biofungicides for brown patch and large patch disease control will be assessed through disease severity ratings and quantification of the Rhizoctonia fungal development also through DNA-based methods. Implementation of research results to stakeholders will be facilitated through workshops in CT and SC, and development of a best practices biocontrol bulletin. Impact will be assessed through prospective surveys of workshop participants. This project addresses a significant need to expand turfgrass disease IPM strategies for school athletic fields and lawns, particularly in states and municipalities where synthetic pesticides are prohibited.
Animal Health Component
50%
Research Effort Categories
Basic
50%
Applied
50%
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
2161620116050%
2161621116050%
Goals / Objectives
Our project intends to provide new guidance on the implementation of biofungicides, also referred to as introduced biological antagonists (i.e., IBAs),as efficacious management tools for turfgrass diseases. Currently, published reports examining IBAs have showninconsistent results in controlling turfgrass diseases. Lack of efficacy has resulted in poor adoption of IBAs, even in pesticide-free areas where local or state legislation limts the use of synthetic pesticides for turfgrass maintenance. Our work intends to combine specific cultural practices with IBA applications as a means to enhance survivalof living bacteria contained in these products. We believe that enhancing survival of these bacteria will improve efficacy against common foliar diseases impacting both cool and warm season turfgrasses maintained in transition climates. Specific goals include:1. Determine if nutritional supplements applied to foliage increase survival of IBAs in the phyllosphere and how increased survival impacts production of antibiotics produced by the organisms contained in the products examined.2. Determine if IBAs have a host preference among cool and warm season grasses.3. Determine how application timing (i.e., diurnal timing) impacts IBA survival and disease caused by Rhizoctonia solani.
Project Methods
Greenhouse studies will be conducted to evaluate the impact of niche-clearing and nutritional supplement applications on IBA population dynamics and antibiotic production. P. chlororaphis and B. subtilis responses will be examined separately in asynchronous companion studies. Treatments will include a non-treated control and an incomplete factorial of P. chlororaphis AFS009 applied as Zio at 6 oz/1000ft2 in combination with niche-clearing pre-treatment [no vs. yes (ZeroTol 2.0, peroxyacetic acid and hydrogen peroxide)] and nutritional supplements [blackstrap molasses alone (3.0 fl.oz./1,000 ft2); hydrolyzed soy protein alone (Amino Pro V at 1.0 fl.oz./1,000 ft2); or combination]. The companion study will include the same treatments, but substitute B. subtilis QST713 (Rhapsody at 10 fl.oz./1000ft2) in lieu of P. chlororaphis. Biofungicides tank-mixed with nutritional supplements will be applied 2-3 hours after niche-clearing pre-treatment. Treatments will be applied twice on a 7-d interval during each experimental run. Studies will be conducted in a randomized complete block design with four blocks. Each study will be completed twice. IBAs will be quantified from turf foliage at timepoint 0, weighed to ascertain total mass, and immediately frozen using liquid nitrogen. Sampling of tissue will proceed 1, 3, and 7 days after each treatment (DAT). To measure phyllosphere population dynamics ofP. chlororaphisAFS009 (Zio), we will employ a proprietary strain-specific qPCR TaqMan assay developed by AgBiome to quantify DNA of the target organism. Similarly,B. subtilisQST713 (Rhapsody) populations will be quantified using a strain-specific qPCR TaqMan protocol developed by Mendis et al. (2018). Secondary metabolite (i.e., antibiotics) production from both IBAs will be quantified through high performance liquid chromatography and mass spectroscopy. Verdure samples (i.e., 10 g) will be transferred to 250 mL polypropylene conical tube, combined with 30 mL acetonitrile and placed on an orbital shaker for 30 min (200 rotations min-1). A 10 mL aliquot will then be transferred to a 20 mL vial and centrifuged for 15 min at 3500 rpm before filtering 1 mL through a 0.45 µm nylon membrane syringe filter in a 2 mL HPLC chamber vial. Purified secondary metabolites will be quantified for bothB. subtilisQST713 (i.e., surfactin) andP. chlororaphisAFS009 (i.e., pyrrolnitrin and phenazines) using HPLC diode-array detection on an Agilent-1260 Infinity equipped with a C18column.A two-year field study will be conducted to evaluate the impact of niche-clearing and supplemental nutrient application on IBA populations and control of diseases caused by R. solani (i.e., brown patch on ryegrass and large patch on zoysia grass). Field sites established as perennial ryegrass or zoysia grass will be used. All plots will measure 1.8 x 1.8 m and buffer strips between plots will be used to minimize movement of applied material into adjacent plots. Both locations will be inoculated withRhizoctoniasolanito promote disease development within each plot. The pathogenR. solaniwill be grown in the laboratory on sterilized rye grain for 14 d and 10 cm3of infested grain will be used to inoculate 4 points within 0.6 m from each corner of all individual experimental plots. All plots will be niche-cleared with ZeroTol 2.0 prior to treatment. Nutrient supplements Amino Pro V and Blackstrap Molasses will be applied together at low labeled rates and in combination with Rhapsody (10 fl.oz./1,000 ft2) or Zio (6 oz/1,000 ft2). Treatments will be replicated four times in a randomized complete block design. IBA populations will be quantified from foliage harvested at timepoint 0 as described above, and treatments will be applied shortly after. A second application will be applied 7 DAT, then turf sampling and IBA quantification will continue for one week at 1, 3, and 7 DAT. At 14-days after initial treatment, all plots will be inoculated with R. solani. The treatment regimen will continue two more weeks and disease ratings will be visually assessed 14 days after inoculation. The same plot randomization will be utilized in both years to observe the cumulative impact of treatment implementation on biofungicide establishment. Treatment efficacy will be evaluated based on visual assessments of symptoms and Rhizoctonia quantification (qPCR) in thatch and foliage using a qPCR assay developed by Schulze and others (2016). The pathogen will be quantified within cores (2.5-cm diam × 5-cm deep) containing foliage and thatch. During each sampling event, three cores spaced at 5-cm intervals, 5 to 15 cm from inoculation points will be collected and pooled to determine the pathogen abundance before inoculation, and spread of the pathogen from inoculation points, after inoculation. Samples will be collected at timepoint 0 to establish pre-treatment pathogen population and again 7 days after the second application to assess treatment effects on resident pathogen populations prior to inoculation. A final sampling event will occur at the initial onset of symptoms at point-inoculations. Treatment effects on Rhizoctonia populations will be determined by comparing abundance of Rhizoctonia DNA in foliage and thatch during both the pre- and post- inoculation periods.A panel of hosts will be assayed in the greenhouse for persistence of P. chlororaphis and B. subtilis using qPCR as described above. For cool season turf in CT, we will survey Perennial Ryegrass, Tall Fescue, Kentucky Bluegrass, and Creeping Bentgrass. For warm season turf in SC, we will survey Perennial Ryegrass (as a control), Zoysia japonica, St. Augustine, Centipede, and Bermuda. Both locations will also survey Bean as a host established previously to be highly conducive of IBA establishment. Grass tillers cut at the chlorophyll line or leaf disks from bean leaves providing comparable surface area as turf samples will be collected from each experimental potting at timepoint 0, weighed to ascertain total mass of sample, and immediately frozen using liquid nitrogen. After timepoint 0 sample collection, all hosts will be treated with a biofungicide (Rhapsody-10 fl.oz./1,000 ft2 or Zio-6 oz./1,000 ft2). All plots will be niche-cleared with ZeroTol 2.0 prior to biofungicide treatment. Sampling of turf tissue will procced 1, 3, and 7 DAT.Field studies will be conducted to evaluate the impact of application time of day on IBA establishment and persistence in the phylloplane. This experiment will be conducted in CT and SC on their respective host turf species. High-rate applications of P. chlororaphis or B. subtilis will be applied every 7 d at 8am, 2pm, or 8pm. The experiment will be completed twice in the same field location on established turfgrass at respective locations to examine multi-year effects of treatments. Turf plants will be collected at the chlorophyll line at timepoint 0 and14 d after initial treatment for qPCR as described above. Treatment applications will continue every 7-d for 42 d to evaluate IBA application timing on brown patch and large patch symptom development. All plots will be niche-cleared with ZeroTol 2.0 prior to treatment and IBAs will be tank-mixed with nutritional supplements.For all experiments, DNA (IBA and/or pathogen), metabolite concentration, and visual disease assessments will be analyzed to identify significant treatment effects over time and locations using the MIXED procedure of SAS 9.4.

Progress 09/01/23 to 08/31/24

Outputs
Target Audience:Target audiences for the CPPM-ARDP project examining biological controls for use in turfgrass systems include Master Gardeners, Extension agents, commercial growers, landscape contractors, athletic field managers, golf course superintendents and homeowners. Changes/Problems:Since beginning the project in late 2023, one of the biological control organisms of interest, Pseudomonas chlororaphis AFS009, was sold to a new company, Certis Biologicals. Over the same period, it has also come to light that previously developed products (i.e., Zio and Howler) containing the desired organism, did not contain a living strain of P. chlororaphis and that the impacts of the product applications were more a direct result of secondary metabolite(s) (i.e., pyrrolnitrin and others) contained in the formulated product rather than activities from a living biological. Isolation attempts and live/dead cell assays of formulated product in project directors' labs' failed to identify the presence of viable P. chlororaphis cells. Recently published research at Clemson University from Wesche et al 2024 corroborated these findings. Therefore, future experiments in this project examining P. chlororaphis will focus efforts on existing pyrrolnitrin analysis with reduced emphasis on DNA quantification. Limited-scale qPCR-based quantification of P. chlororaphis will be performed in our proposed studies to validate Wesche et al., culture-dependent methods and to confirm that pyrrolnitrin concentration in Zio/Howler treated turf is independent of viable cells. Experiments are in the planning stage to include the additive propidium iodide in future DNA extractions for qPCR quantification in greenhouse studies (Obj. 1a) to differentiate living from non-living bacterial cells harvested 1 and 7 days after treatment. What opportunities for training and professional development has the project provided? Nothing Reported How have the results been disseminated to communities of interest? Khanal, B., and Roberts, J.A. 2024. Can Biological Controls Be Utilized to Manage Turfgrass Disease in Urban Landscapes.2024 Clemson College of Agriculture, Forestry, and Life Sciences Graduate Research Symposium. August 19-20, 2024: Piedmont Research and Education Center Expo Center, Clemson, SC. Project descriptions and preliminary results were shared in the poster presentation by graduate student, Bunu Khanal, participating in the Clemson Graduate Research Symposium in August 2024. Additional results will be shared at further scientific and extension meetings as experiments are completed. Howard, J., Crowell, C., Martinez, I., Jaworski, R., Amtower, H., and Inguagiato, J. 2024. Influence of Nutritional Supplements and Niche-Clearing on Population of Biocontrol Organisms and Brown Patch Control. July 25, 2024: UConn Turfgrass Field Day, Storrs, CT. Howard, J., Crowell, C., Martinez, I., Jaworski, R., Amtower, H., and Inguagiato, J. 2024. Influence of Niche-Clearing and Application Timing on Population of Biocontrol Organisms and Brown Patch Control. July 25, 2024: UConn Turfgrass Field Day, Storrs, CT. Information on biological control and preliminary project results were presented by graduate student Joseph Howard during the UConn Turfgrass Field Day. The extension/outreach event had 265 attendees representing municipal school grounds, athletic field managers, and golf course superintendents held at UConn Plant Science Research and Education Facilities What do you plan to do during the next reporting period to accomplish the goals?Additional field and greenhouse experiments are scheduled to commence in late-summer/early fall at Clemson University to meet objectives 1a, 1b, 2, and 3. Field studies (Objectives 1b and 3) will be performed in Sept-Oct and along with greenhouse studies throughout the fall/winter. Future work at University of Connecticut includes previously scheduled greenhouse studies (Sept - Feb) related to objective 2 and completion of the final experimental run for Rhapsody associated with objective 1a. Field studies (Objectives 1b and 3) initiated this past summer will be repeated as planned next Jun - Aug). For experiments that have already been performed at both locations, quantitative assessment of introduced biological controls and secondary metabolites is also underway, and will continue to be completed on samples from experiments conducted this winter.

Impacts
What was accomplished under these goals? Greenhouse and field experiments were performed at Clemson University Pee Dee Research and Education Center throughout the reporting period relating to Objectives, 1a, 1b, and 2. Similarly, projects were conducted on cool-season turfgrass at the University of Connecticut relating to Objectives 1a (greenhouse), 1b (field), and 3 (field). Each of these experiments were performed in accordance with previously defined methods outlined in the grant proposal and samples have been partially processed in laboratory analyses.

Publications

  • Type: Conference Papers and Presentations Status: Other Year Published: 2024 Citation: Khanal, B., and Roberts, J.A. 2024. Can Biological Controls Be Utilized to Manage Turfgrass Disease in Urban Landscapes. 2024 Clemson College of Agriculture, Forestry, and Life Sciences Graduate Research Symposium. August 19-20, 2024: Piedmont Research and Education Center Expo Center, Clemson, SC.