Progress 05/01/24 to 04/30/25
Outputs Target Audience:During the reporting period, the PI (Dorea) and the co-PIs (Cabrera, Nicholson, Van Os, and Lee) reached target audiences through research presentations. The PI and Co-PIs of this project reached agricultural professionals, scientists, and researchers working with high-throughput phenotyping, computer vision, precision livestock farming, genomic applications, and farm management. We discussed the challenges and opportunities for technology adoption, data analytics and integration for dairy farming. Changes/Problems:
Nothing Reported
What opportunities for training and professional development has the project provided?The PI is directly supervising one Postdoctoral fellow and a PhD student and co-supervising a Postdoctoral fellow with Drs. Cabrera and Nicholson. In addition, an undergraduate student has been recruited to assist with on-farm data collection and data processing. How have the results been disseminated to communities of interest?There has been significant dissemination of data to the research community during the 2024 reporting.Results are being disseminated through national and international conferences, scientific publications, and outreach activities and our extension platform developed as part of this proposal to inform farmers, industry, students, and researchers about sensing technology and artificial intelligence for animal farming.Abstracts were presented in person at the American Dairy Science Association annual meeting, US Precision Livestock Farming Conference (USPLF), American Society of Animal Science annual meeting, and many other conferences listed below. Additionally, two papers have been published, and four additional manuscripts are in progress for the year 2025 reporting. What do you plan to do during the next reporting period to accomplish the goals?We will continue to work towards the goals. We will actively develop the extension and outreach programs and ensure that the research articles planned for 2025 are published and disseminated through conferences and research symposiums.
Impacts What was accomplished under these goals?
We have collected data on the proposed animals, and we have already published studies targeting objectives 1, 2 and 3 of the proposal, including a paper addressing the most important question of the proposal that is related to the use of technology for early detection of subclinical ketosis. For the reporting year of 2024, we have published three scientific articles and have four articles under review, that will be included in reporting year 2025. We have also published one extension article. We have conducted the proposed activities under the extension goals, including the participation on the UW Science Expedition and Wisconsin Science Festival in 2024, showcasing the project and the use of the technology and artificial intelligence in animal farming for K-12 and Wisconsin community: (1)2024 Wisconsin Science Festival Expeditions: Artificial Intelligence for Animal Farming, ~901 participants attended: K-12 students from 15 schools in Wisconsin; (2) 2024 UW-Science Expeditions: Digital Technologies for Animal Monitoring - ~800 participants attended: K-12 and general public.As part of this project, we created the Smart Farm Hub platform (https://dairyintelligence-staging.webhosting.cals.wisc.edu), where information is being shared and disseminated. The Instagram account (@smartfarmhub) was also created to support the website and be used to publish the "shorts" of interviews, full interviews, students spotlight profile, and industry spotlight, with experts about technology in animal farming.This platform aims to provide dairy farmers, students, and industry professionals with the knowledge and tools necessary to adopt and manage digital technologies. To ensure the success of our extension platform, we have developed a series of content available through multiple platforms. Since its establishment the Smart Farm Hub has yielded 2 extension articles, 2 invited webinars, 2 invited presentations, and 7 short educational videos. The educational content developed by our team can be accessed through the Smart Farm Hub website (smartfarm.cals.wisc.edu/) and Instagram (@smartfarmhub) pages. Since its launch, the Smart Farm Hub has demonstrated significant reach and engagement. Our website has been accessed 2,396 times by 766 users, with 51% of the users globally, with 51% of users based in the United States. Our Instagram page has gathered 342 followers and more than 3,500 views of short educational videos.Our webinars were watched live by more than 200 viewers and their recordings have gathered more than 700 views. Currently, the Smart Farm Hub is actively developing an interactive list of precision dairy technologies to be posted on its website. We are also collaborating with the University of Wisconsin-Madison Dairy Extension team to develop a series of articles on the use and management of automated milking systems that will be posted through our channels and trade magazines. Two webinars were delivered: (1) New Technologies in Dairy Farminghttps://www.youtube.com/watch?v=T-7TakuQao0; (2) Technology Adoption and AI in the Dairy Industryhttps://www.youtube.com/watch?v=RiedBbTwLZs
Publications
- Type:
Peer Reviewed Journal Articles
Status:
Published
Year Published:
2024
Citation:
1. Ferreira, R.E., de Luis Balaguer, M.A., Bresolin, T., Chandra, R., Rosa, G.J., White, H.M. and D�rea, J.R., 2024. Multi-modal machine learning for the early detection of metabolic disorder in dairy cows using a cloud computing framework. Computers and Electronics in Agriculture, 227, p.109563.
- Type:
Peer Reviewed Journal Articles
Status:
Published
Year Published:
2024
Citation:
Menezes, G.L., Bresolin, T., Ferreira, R., Holdorf, H.T., Apelo, S.I.A., White, H.M. and D�rea, J.R., 2024. Near-infrared spectroscopy analysis of blood plasma for predicting nonesterified fatty acid concentrations in dairy cows. JDS communications, 5(3), pp.195-199.
- Type:
Peer Reviewed Journal Articles
Status:
Published
Year Published:
2024
Citation:
Menezes, G.L., Mazon, G., Ferreira, R.E., Cabrera, V.E. and Dorea, J.R., 2024. Artificial intelligence for livestock: a narrative review of the applications of computer vision systems and large language models for animal farming. Animal Frontiers, 14(6), pp.42-53.
- Type:
Other
Status:
Published
Year Published:
2024
Citation:
Smart Farm Hub. (2024, July). Precision dairy farming: A glimpse into the future. University of WisconsinMadison, College of Agricultural and Life Sciences. Retrieved from https://smartfarm.cals.wisc.edu/wp-
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
1. L. R. Coelho, G. L. Menezes, T. Cunha, L. L. Hernandez, J. R. R. Dorea, and S. I. Arriola Apelo. 2024. Near-infrared spectroscopy analysis of blood plasma, urine, and feces during the prepartum period for predicting sub-clinical ketosis in dairy cows. J. Dairy Sci. Vol. 107, Suppl. 1, p. 67.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
E. Casella, G. J. M. Rosa, and J. R. R. Dorea. 2024. Exploring symbolic regression for body weight prediction in dairy calves. E. Casella, G. J. M. Rosa, and J. R. R. Dorea. J. Dairy Sci. Vol. 107, Suppl. 1. p. 22.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
A. A. C. Alves, R. E. P. Ferreira, G. J. M. Rosa, and J. R. R. Dorea. 2024. Exploring Siamese neural networks for few-shot individual recognition of dairy cows in open-set scenarios. A. A. C. Alves. J. Dairy Sci. Vol. 107, Suppl. 1. p. 42.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
M. E. Montes, G. L. Menezes. D. Reinemann, L. L. Hernandez, and J. R. Dorea. 2024. Deep learning and image processing for high-throughput udder phenotyping in dairy cows. J. Dairy Sci. Vol. 107, Suppl. 1. p. 138.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
R. E. P. Ferreira, T. Bresolin, H. T. Holdorf, H. M. White, and J. R. R. Dorea. 2024. Early detection of subclinical ketosis in Holstein dairy cows using computer vision and recurrent neural networks. J. Dairy Sci. Vol. 107, Suppl. 1. p. 139.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
E. Casella, A. Vang, G. L. Menezes, G. J.M. Rosa, L. L. Hernandez, and J. R. R. Dorea. 2024. Phenotyping mammary gland of dairy cows through histological image analysis. J. Dairy Sci. Vol. 107, Suppl. 1. p. 313.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
Dorea, J. R. R. and Menezes, G. L. 2024. Artificial intelligence and machine learning to improve livestock farming, Journal of Animal Science, Volume 102, Issue Supplement_3, September 2024, Page 296, https://doi.org/10.1093/jas/skae234.338
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
G. Menezes, A. Franco, J. R. R. Dorea. 2024. Advancing Agricultural Efficiency: Unmanned Aircraft Vehicle in Soil and Pasture Management. EAAP 75th Annual Meeting, Florence, Italy, 2024, p.519
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
Rafael E. P. Ferreira, Maria Angels de Luis Balaguer, Ranveer Chandra, Guilherme J. M. Rosa, Jo�o R. R. D�rea. 2024. Integrating genomics and phenomics data for the early detection of subclinical ketosis in dairy cows. Proceedings of the European Precision Livestock Farming, Bologna-Italy.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
A. Negreiro, A. Alves, R. Ferreira, T. Bresolin, G. Menezes, E. Casella, G. J. M. Rosa, and J. R. R. D�rea. 2024. Siamese Networks for identification of Holstein cattle during growth and across different physiological stages. Proceedings of the European Precision Livestock Farming, Bologna-Italy.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
Artificial Intelligence for farm management and precision phenotyping. 46th ADSA Discover Conference: Milking the Data Value Driven Dairy Farming. Chicago-IL, May 7th, 2024.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
Advances in food systems: predictive analytics and AI. Food Research Institute Conference. UWMadison, May 14, 2024.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
Machine learning for livestock systems: statistical and practical challenges. Conference of Applied Statistics in Agriculture. Ames, Iowa, May 1516, 2024.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
Artificial intelligence and machine learning to improve livestock farming. ASAS Annual Meeting. Calgary, Canada, July 2125, 2024.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
Artificial intelligence and machine learning to improve livestock farming. ISRP 2024 International Symposium on Ruminant Physiology. Chicago, IL, August 2629, 2024.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2024
Citation:
Leveraging Artificial Intelligence to Optimize Farm Management Decisions. AI for Livestock Conference. Vi�osa, Brazil, November 1016, 2024.
- Type:
Other Journal Articles
Status:
Published
Year Published:
2024
Citation:
Hoards Dairyman. (2024, October). What affects the adoption of precision tech? Hoards Dairyman. Retrieved from https://hoards.com/article-35724-what-affects-the-adoption-of-precision-tech.html#dComments
|
Progress 05/01/23 to 04/30/24
Outputs Target Audience:During the reporting period, the PI (Dorea) and the co-PIs (Cabrera, Nicholson, Van Os, and Lee) began reaching target audiences through research presentations. The PI and Co-PIs of this project reached agricultural professionals, scientists, and researchers working with high-throughput phenotyping, computer vision, precision livestock farming, genomic applications, and farm management. We discussed the challenges and opportunities for technology adoption, data analytics and integration for dairy farming. Changes/Problems:
Nothing Reported
What opportunities for training and professional development has the project provided?The PI is directly supervising a Postdoctoral fellow and a PhD student and co-supervising a Postdoctoral fellow with Drs. Cabrera and Nicholson. In addition, an undergraduate student has been recruited to assist with on-farm data collection and data processing. How have the results been disseminated to communities of interest?There has been significant dissemination of data to the research community during the 2023 reporting.Results are being disseminated through national and international conferences, scientific publications, and outreach activities and our extension platform developed as part of this proposal to inform farmers, industry, students, and researchers about sensing technology and artificial intelligence for animal farming.Abstracts were presented in person at the American Dairy Science Association annual meeting, US Precision Livestock Farming Conference (USPLF), American Society of Animal Science annual meeting, and many other conferences listed below. Additionally, two papers have been published, and four additional manuscripts are in progress for the 2024 reporting year. We published one image dataset for animal identification through OSF. What do you plan to do during the next reporting period to accomplish the goals?We will continue to work towards the goals. We will actively develop the extension and outreach programs and ensure that the research articles planned for 2024 are published and disseminated through conferences and research symposia.
Impacts What was accomplished under these goals?
(1) We have collected data on more than 300 cows during transition period as proposed in objective 1 and 2. Blood samples were collected for analyses of plasma non-esterified fatty acids (NEFA) and beta-hydroxybutyrate (BHBA). A total of 2.5 million depth and infrared images were collected for objectives 1 and 2. The images were all pre-processed and analyzed for Body Condition Score (BCS) and subclinical ketosis detection. Behavior data (lying time, rumination time, standing time, visits at the feed bunk, number of meals, meal duration, and cow records including days in milk, parity, and health records on previous lactation. These images are also being used to build models for animal identification and combined with cow history for disease prediction. We have participated in the UW ScienceExpedition and Wisconsin Science Festival in 2023, showcasing the project and the use of the technology and artificial intelligence in animal farming for K-12 and Wisconsin community: (1)2023 Wisconsin Science Festival Expeditions: Artificial Intelligence for Animal Farming, 988 participants attended: K-12 students from 15 schools in Wisconsin; (2) 2023 UW-Science Expeditions: Digital Technologies for Animal Monitoring - 850 participants attended: K-12 and general public.Our stations reached a total of 1,838 participants on these two events. As part of this project, we created the Smart Farm Hub platform (https://dairyintelligence-staging.webhosting.cals.wisc.edu), where informationwill start to be archived and disseminated. The Instagram account (@smartfarmhub) was also created to support the website and be used to publish the "shorts" of interviews, full interviews, students spotlight profile, and industry spotlight, with experts about technology in animal farming. The first sequence of publications will encompass the interviews collected during the 46thADSA Discover Conference. For the following year, a sequence of podcasts and shorts will be scheduled and release as part of the extension and outreach program. Additionally, we will continue engaging with K-12 through events as UW Science Expeditions and Wisconsin Science Festival.
Publications
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Ferreira, R. E. P., M. C. Ferris, and J. R. R. Dorea. 2023. Optimizing training sets for individual identification of dairy cows. J. Dairy Sci. 106:429. Annual Meeting ADSA, Ottawa, Canada.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Dorea, J. R. R. Artificial intelligence for livestock systems. 2022. J. Dairy Sci. 105:98. Annual Meeting ADSA, Kansas City-MO, USA.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Artificial Intelligence for farm management and precision phenotyping. 46th ADSA Discover Conference: Milking the Data Value Driven Dairy Farming. Chicago-IL, May 7th, 2024.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Transforming Dairy Farm Management with the Power of Artificial Intelligence. IDF World Dairy Summit. Chicago-IL, October 15th, 2023.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Digital technologies and Machine learning: A new way to look at novel traits at spatial and temporal dimensions. Annual Meeting of American Association of Animal Science (ASAS), Albuquerque-NM, July 22nd, 2023.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Precision Livestock Farming for Optimal Management. SIAM, Moroccan International Agricultural Show. Meknes, Morocco. May 4th, 2023.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Artificial Intelligence and Machine Learning for Agriculture. Summer School on Data Science. Fundacao Getulio Vargas. Rio de Janeiro, Brazil, Jan 24th, 2023.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Leveraging Artificial Intelligence to Optimize Farm Management Decisions. National Agricultural Producers Data Cooperative. University of Nebraska-Lincoln. September 19th, 2023.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Connectivity for Rural Areas and Sensing Technology Deployment. FCC Precision Ag Taskforce - Connectivity Demand. February 9th, 2023.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Ferreira, R. E. P., T. Bresolin, P. L. J. Monteiro, M. C. Wiltbank, and J. R. R. Dorea. 2023. Using computer vision to predict cyclicity of dairy cows during the transition period through 3D body surface images. J. Dairy Sci. 106:428. Annual Meeting ADSA, Ottawa, Canada.
- Type:
Conference Papers and Presentations
Status:
Accepted
Year Published:
2023
Citation:
Computer vision and Machine Learning for Optimized Farm Management Decisions. CALS Data Science Showcase. November 1st, 2023.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
AI from Foundations to Applications. Exploring Artificial Intelligence @ UWMadison. June 30th, 2023.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Shaping Futures with Data and Computing. Research Bazaar: Closing Panel. February 3rd, 2023.
- Type:
Websites
Status:
Published
Year Published:
2023
Citation:
Smart Farm Hub is the extension and outreach platform created for the project that will disseminate the results and provide educational materials.
Website:
https://dairyintelligence-staging.webhosting.cals.wisc.edu
Instagram:
@smartfarmhub
- Type:
Journal Articles
Status:
Published
Year Published:
2023
Citation:
Ferreira, R. E. P., Y. J. Lee., J. R. R. Dorea. 2023. Using pseudo-labeling to improve performance of deep neural networks for animal identification. Scientific Reports. 13:13875. https://doi.org/10.1038/s41598-023-40977-x
- Type:
Journal Articles
Status:
Published
Year Published:
2023
Citation:
Menezes, G. L., T. Bresolin, R. E. P. Ferreira, H. T. Holdorf, H. M. White, S. I. A. Apelo, J. R. R. Dorea. 2023. Near-infrared spectroscopy analysis of blood plasma for predicting nonesterified fatty acid concentrations in dairy cows. JDS Communication. https://doi.org/10.3168/jdsc.2023-0458
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Ferreira, R. E. P., and J. R. R. Dorea. Cloud computing to automate phenotype collection and data analyses in dairy systems. Proceedings of the US Precision Livestock Farming, p.131. Knoxville-TN.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Bresolin, T., R. E. P. Ferreira, G. J. M. Rosa, and J. R. R. Dorea. 2023. Computer vision on the edge: A computing framework for high-throughput phenotyping in livestock operations. Proceedings of the US Precision Livestock Farming, p.151. Knoxville-TN.
- Type:
Conference Papers and Presentations
Status:
Published
Year Published:
2023
Citation:
Menezes, G. L., A. Negreiro, R. E. P. Ferreira, and J. R. R. Dorea. 2023. Identifying dairy cows using body surface keypoints through supervised machine learning. Proceedings of the US Precision Livestock Farming, p.360. Knoxville-TN.
|