Performing Department
(N/A)
Non Technical Summary
Non-Technical SummaryAquaculture is the fastest growing segment of the global food industry and plays an increasingly important role in feeding the world's population. Intensive aquaculture using increased stocking densities, compressed rearing cycles, monocultures, antibiotics, and other strategies aimed at efficient protein production has been complicated by outbreaks of known and newly emergent pathogens, often with devastating consequences. IHNV, the virus that is targeted in this proposal, has spread worldwide from its origin in North America, and its danger is illustrated by a recent outbreak in the Canadian salmon farming industry that was estimated to have caused $200 million in lost sales in a single year. Vaccination is far and away the most effective and cost effective approach to limiting pathogen outbreaks, though the present technology is costly, cumbersome and potentially unsafe for both producers and consumers.Lumen Bioscience has invented and developed technology that allows the genetic manipulation of the widely consumed algae Spirulina. Spirulina is very high in protein and micronutrients and is consumed by humans and fed to their animals globally. This valuable food crop has resisted genetic manipulation despite decades of effort until Lumen scientists discovered the means to manipulate the organism, much as is done with other food crops. Lumen scientists are able to insert or remove genes from Spirulina, allowing optimization of its growth and the use of Spirulina to produce proteins it otherwise would not. One such protein safely and potently stimulates the immune system, creating "memory", which is the essential feature of an effective vaccine.Using Spirulina to generate vaccine proteins, combined with the delivery of such vaccine-bearing nutritious algae in the form of food, offers a number of potent advantages, not least being the avoidance of trauma to the fish, cost savings and safety for fish farm workers, and the absolute avoidance of fish products contaminated with needle fragments or other debris from the conventional vaccination process. Initial data generated at Lumen indicate that the inert vaccine protein we have designed, bearing structures from the IHN virus, is recognized by the fish immune system much like the actual IHN virus is. We will administer the vaccine-bearing algae to fish via their digestive system, to mimic eating vaccine-laden food pellets, and assess whether a protective vaccine response is induced. Positive findings in these experiments will lay the groundwork for further optimization of both the vaccine particle design, and the use of Spirulina for this and other vaccine and therapeutic applications, for both human and animal health goals.
Animal Health Component
70%
Research Effort Categories
Basic
30%
Applied
70%
Developmental
(N/A)
Goals / Objectives
The overall goal of the project is the development of a novel vaccine designed to protect trout and salmon against Infectious Hematopoietic Necrosis Virus (IHNV), an important pathogen affecting commercial fish farms as well as state and native community fisheries. The vaccine will be non-living and recombinant, and will be both produced and delivered in the cyanobacerium Spirulina, using Lumen's exclusive and patent-pending genetic technology. Using a food organism for oral/mucosal delivery will allow the realization of a number of economic and safety advances, including needle-free delivery, protecting both consumers and technicians; minimal fish handling and trauma, thereby limiting subsequent growth stunting and scarring; cost advantages owing to the extremely low-cost nature of protein production in Spirulina, coupled with the ability to deliver the vaccine as raw algal biomass without costly extraction and purification steps.Task 1: Inoculation of rainbow trout with experimental Spirulina-VLP vaccines and assessment of toxicity.?Task 1 Summary: Experimental vaccine, in the form of lyophilized Spirulina biomass expressing engineered IHNV-derived antigens, will be administered to rainbow trout. Representative fish will be harvested three days following both the prime and boost dose for analysis of gene expression associated with the innate immune system activation. Specific antibody responses in the serum and gut mucus will be quantified by ELISA and tested for pathogen neutralizing activity in in vitro viral neutralization assays. Experimental vaccines will be compared to an injected IHNV-G protein DNA vaccine as a positive control.Milestone 1.1: Obtain and grow-out fishMilestone 1.2: Inoculate fish on schedule per protocolMilestone 1.3: Collect observational data on morbidity and mortality associated with vaccine administrationMilestone 1.4: Collect gut, spleen, and head-kidney tissues, and gut mucus and serum samples for subsequent analysis of immune stimulationTask 2: Assess clinical efficacy of an experimental Spirulina-based vaccine for IHNV.?Task 2 Summary: A subset of fish treated with the prime/boost protocol in Task 1 will be retained at time of terminal harvest and challenged with live, virulent IHNV. Experimental fish will be exposed to pathogen and subject to interval assessment of both morbidity, in the form of distress or lesion, and mortality. A cohort of unexposed but vaccinated fish will serve as a control. Vaccination with irrelevant Spirulina, IHNV vaccine strains of Spirulina, and a positive control vaccine will be compared.?Milestone 2.1: Expose experimental and control fish to live, virulent IHNV and collect interval data on mortality and time to mortalityTask 3: Assess activation of the innate immune system in relevant tissues by RT-qPCR.Task 3 Summary: Since innate activation typically occurs hours to days following interaction with infection or vaccine, fish will be harvested 48 hours after both prime and boost vaccine doses, and gut tissue, spleen, and head-kidney will be tested for specific transcript abundance by RT-qPCR. Spleen and head-kidney are major teleost lymphoid organs and the sites of innate:adaptive cell interactions. Gut tissue also harbors immune effector cells, and oral vaccination is predicted to activate such cells. Differential patterns of activation, both in terms of transcript identity and their relative magnitude of abundance will be correlated with other indices of activation, including antibody titers, viral neutralization, and clinical protection for animals in the various study arms. We will generate a dataset linking the innate and adaptive immune responses, and these correlations will inform vaccine design, adjuvant strategy, and dosing regimen in future experiments.Milestone 3.1: Extract RNA, and synthesize first strand cDNA from tissue samples collected in Task 1?Milestone 3.2: Perform qPCR using paired control and experimental primer:probe sets, and correlate these data with observations from Tasks 2, 4, and 5Task 4: Measure the humoral immune response to vaccination by ELISA?Task 4 Summary: Serum and gut mucus samples collected following prime and boost inoculations in Task 1 will be analyzed by capture ELISA for specific immunoglobulins able to bind IHNV-derived epitopes used in the experimental vaccines.?Task 4 Details and Milestone: Gut mucus and serum will be harvested from fish in Task 1. Samples will be processed per established protocols and stored at 4°C. Freeze-thaw cycles will be avoided as unpublished reports suggest that the specificity of IgT in vitro is abolished by freezing. Samples will be collected and shipped overnight on wet ice for expedited analysis at Lumen.Task 5: Assess the specific IHN viral neutralization properties of serum and mucus?Task 5 Summary: In vitro viral neutralization assay (VNA) is a reliable prediction of clinical effectiveness. With the goal of creating a powerful baseline dataset linking indices of immune activation (i.e., antibody titer, clinical efficacy, innate activation) for the rapid and efficient development of improved experimental vaccines, in vitro VNA is essential. Clinical samples predicted to harbor specific antibodies (i.e., gut and mucus samples also analyzed by ELISA in Task 4) will be assessed for their ability to inhibit or abolish IHNV infection of cultured cells.Task 5 Details and Milestone: Aliquots of the samples obtained and processed in Task 4 will be used in these assays. Cultures of Epithelioma Papulosum Cyprini (EPC) cells maintained at 15oC in minimum essential medium will be exposed to experimentally determined inocula of WRAC- strain IHNV which had been pretreated with i) PBS, ii) a standard dilution curve of hyperimmune trout serum (positive control), iii) a standard dilution curve of naïve trout serum (negative control), or iv) a dilution curve of experimental serum or gut mucus. Treated EPC monoloayers will be stained with crystal violet and plaque number assessed. Lumen has worked with the US Geologic Survey fish facility in Seattle and has acquired expertise and necessary reagents to complete these assays at Lumen.
Project Methods
MethodsTask 1: Inoculation of rainbow trout with experimental Spirulina-VLP vaccines and assessment of toxicity.?Task 1 Details: Rainbow trout will be obtained as fry by contract research organization, Oregon State University, John L. Fryer Aquatic Animal Health Laboratory, and grown until large enough for vaccination; estimated at 90 days post hatch, or 4g in size. Fish will be maintained to modestly restrict growth rate to maintain susceptibility to viral challenge (see below). Prime inoculation, will take place on day 0, and a boost dose 400 degree days later (at 15°C ambient) approximately 28 days. Vaccination is by oral gavage with 18g catheter tubing, or by intraperitoneal injection with an 18G needle. Dry Spirulina biomass will be resuspended in sterile PBS buffer. Fish will be harvested for collection of gut tissue (oral groups), spleen, and head-kidney (oral and IP groups) at 72 hours after both prime and boost doses. Fish will be harvested for collection of serum and gut mucus on the day prior to the boost dose, and 400 degree days after the boost. Fish will be maintained, fed, and monitored at least daily for signs of distress or mortality, per facility SOP.Task 2: Assess clinical efficacy of an experimental Spirulina-VLP vaccine for IHNV.?Task 2 Details: 20 fish in each group will be exposed to live IHN virus 400 degree days after booster dose, and 10 maintained as healthy controls. Experimental fish will be exposed to WRAC-strain IHN virus at 100,000 plaque-forming units/ml and followed at least daily for signs of distress or for mortality. Cumulative percent mortality after 30 days, and mean number of days to death will be determined.Task 3: Assess activation of the innate immune system in relevant tissues by RT-qPCR.Task 3 Details: Tissues harvested in the context of Task 1 will be stored in RNAlater. Tissue samples will be processed in batches. Trizol reagent with bead beating will be used to extract RNA. First strand cDNA will be primed with oligo-dT and synthesized using Applied Biosystem reagents. Previously validated, intron-spanning primer-probe sets specific for acidic ribophosphoprotein (control) and for Mx-1 and Vig-1 (transcription factors), Interleukin-1β, Tumor Necrosis Factor-α, Interleukin-8, Interferon-α, and Interferon-γ will be used to quantitatively amplify experimental cDNA using Applied Biosystems reagents and Step-One Plus thermal cycler system. Relative transcript abundance will be calculated by ??Ct methodology.Task 4: Measure the humoral immune response to vaccination by ELISA?Task 4 Details and Milestone: Gut mucus and serum will be harvested from fish in Task 1, collected at time points just prior to the boost dose (day ~27), and 400 degree days after that dose (day ~54). Samples will be processed per established protocols and stored at 4°C. Samples will be collected and shipped overnight on wet ice for expedited analysis at Lumen. Titrations of gut mucus and serum samples will be analyzed by capture ELISA for specific IgM and IgT against relevant antigens. Raw optical density data obtained from ELISA assays will be subjected to statistical analysis by the method of Frey, et al.Task 5: Assess the specific IHN viral neutralization properties of serum and mucus?Task 5 Details and Milestone: Aliquots of the samples obtained and processed in Task 4 will be used in these assays. Cultures of Epithelioma Papulosum Cyprini (EPC) cells maintained at 15oC in minimum essential medium will be exposed to experimentally determined inocula of WRAC- strain IHNV which had been pretreated with i) PBS, ii) a standard dilution curve of hyperimmune trout serum (positive control), iii) a standard dilution curve of naïve trout serum (negative control), or iv) a dilution curve of experimental serum or gut mucus. Treated EPC monoloayers will be stained with crystal violet and plaque number assessed. Lumen has worked with the US Geologic Survey fish facility in Seattle and has acquired expertise and necessary reagents to complete these assays at Lumen.