Source: UNIVERSITY OF CALIFORNIA, DAVIS submitted to
IMPROVED METHODS FOR FECAL PATHOGEN DETECTION, MONITORING AND MANAGEMENT
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
TERMINATED
Funding Source
Reporting Frequency
Annual
Accession No.
0221152
Grant No.
(N/A)
Project No.
CA-V-PMI-4002-H
Proposal No.
(N/A)
Multistate No.
(N/A)
Program Code
(N/A)
Project Start Date
Mar 1, 2010
Project End Date
Mar 1, 2013
Grant Year
(N/A)
Project Director
Conrad, P.
Recipient Organization
UNIVERSITY OF CALIFORNIA, DAVIS
410 MRAK HALL
DAVIS,CA 95616-8671
Performing Department
PATHOLOGY, MICROBIOLOGY & IMMUNOLOGY
Non Technical Summary
The freshwater, estuarine, and nearshore marine waters of California provide critical resources for drinking water, food production, industry, recreation, and wildlife habitat. Contaminated water compromises the quality of these resources. Fecal pollution is a significant and insidious threat to human and animal health. Potential sources of fecal pollution include agricultural runoff containing livestock feces, sewage outfalls, and stormwater runoff. The practice of intensive food animal production has also come under increasing attack as a major source of water pollution. As the top dairy state, California is the nations number one dairy producer of both milk and manure, with approximately 30 million tons of manure being produced by dairy cattle each year in. Management of this fecal waste as well as the protection of our watersheds as a source of both recreational and drinking water, are two of the states most pressing environmental issues. Water quality monitoring has historically focused on heavy metals, anthropogenic chemicals, and bacterial coliform counts. This methodology does not address the risk due to other pathogenic organisms, such as protozoal parasites that may be present in the aquatic environment as a result of fecal contamination. Cryptosporidium, Giardia, and Toxoplasma are well-known protozoal causes of disease in people and animals, and are usually spread by water contaminated with human and/or animal feces. Similarly, the risk of exposure to pathogenic bacteria is not taken into consideration in water quality monitoring despite the fact that waterborne exposure to some species of bacteria, most notably Vibrio cholerae, Campylobacter, and Salmonella, are known to cause severe diarrheal disease in humans. Our efforts to develop methods for improved T. gondii oocyst concentration and detection will have immediate practical applications for large-scale testing of California surface waters, bivalves, sewage outfalls, and feces from domestic and wild felids. The direct outcome benefit of this component of the project is the production of a sensitive, specific and practical method for the concentration and detection of T. gondii oocysts which will be validated for testing water in coastal areas and coastal-draining watersheds. Overall, federal and state agencies charged with water quality and species management, including range expansion issues, will benefit from the pathogen risk-exposure assessment methods and data produced by this project. Evaluation of the sources of fecal contamination and development of mitigation strategies will help to reduce pathogen pollution in the freshwater and estuarine components of the watershed which provides water to the near-shore marine environment. All these components comprise a vital ecosystem and resource for humans and animals. This project has important implications for the management of agricultural wastewater, as well as threatened wildlife species, and furthers our understanding of the human health risks of local shellfish consumption and potential marketability of shellfish obtained from waters exposed to surface runoff or sewage.
Animal Health Component
100%
Research Effort Categories
Basic
(N/A)
Applied
(N/A)
Developmental
(N/A)
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
7223410110325%
7223310110010%
7123410110325%
7123310110010%
1123410110320%
1123310110010%
Goals / Objectives
We propose a study to develop improved methods of detection and monitoring that can be applied for better livestock and water management. Hypothesis 1: Immunizations with Toxoplasma gondii oocyst wall antigens will elicit specific antibody responses in mice that will allow for the development of monoclonal antibodies (mAbs) for immunomagnetic separation (IMS) with direct fluorescent antibody assay (DFA) applications to concentrate and detect T. gondii oocysts in environmental samples. Objective 1: Develop mAbs to the outer wall of T. gondii oocysts. Objective 2: Utilize these antibodies to develop methods for concentration and detection of T. gondii oocysts by IMS with DFA quantification. Objective 3: Determine the assay sensitivity and specificity for detection of oocysts in water. Hypothesis 2: Fecal indicator bacteria levels will not correlate well with pathogen levels in livestock wastewater sources, and QMRA models that incorporate BacteroIdales as an alternative indicator to FIB for fecal pollution will be able to characterize the relative contribution of livestock, humans, and birds to fecal pollution in ambient waters. Objective 4: Collect wastewater samples from livestock operations in different regions of California. Objective 5: Evaluate concentrations of E. coli FIB, Cryptosporidium, and Giardia spp. in the wastewater samples, as well as quantify Bacteroidales host-specific assay signals for human, livestock, and bird markers. Objective 6: Incorporate these data into the larger WERF dataset in order to compare QMRA software and provide risk assessment tools for livestock and resource managers that can be used to quantify loads and also identify host sources. Outputs: Our efforts to produce specific antibodies, IMS and DFA methods for improved T. gondii oocyst concentration and detection will have immediate practical applications. Our future aims are to utilize these reagents and methods to begin large-scale testing of California surface waters, bivalves, sewage outfalls, and feces from domestic and wild felids. Federal and state agencies charged with water quality and species management, including range expansion issues, will benefit from pathogen risk-exposure assessment methods and data produced by this project. Evaluation of the sources of fecal contamination and development of mitigation strategies will help to reduce pathogen pollution in the freshwater and estuarine components of the watershed which provides water to the near-shore marine environment. All these components comprise a vital ecosystem and resource for humans and animals. This project has important implications for the management of agricultural wastewater, as well as threatened wildlife species, and furthers our understanding of the human health risks of local shellfish consumption and potential marketability of shellfish obtained from waters exposed to surface runoff or sewage.
Project Methods
Hypothesis 1: Plasmids will be constructed containing the entire DNA coding sequence for outer wall proteins of T. gondii published on the Toxoplasma genome database. Each described protein will be will be used for DNA immunizations. The target gene sequence will be PCR amplified using specific primers with overlapping start and stop codons. Recombinant proteins, representing each of the seven identified outer wall proteins, will be produced following established protocols. Seronegative BALB/c mice will be immunized with each plasmid construct and each recombinant protein. After immunization mice will be serologically screened. Mice demonstrating high titers to oocyst wall antigens will be sacrificed and their spleen cells will be harvested for hybridoma formation. Monoclonal antibody production will follow standard methodology for spleen cell/myeloma fusion. Hybridomas will be screened by testing supernatant for reactivity to oocyst wall preparations by ELISA and IFA using intact oocysts. Antibody isotype will be determined and hybridomas producing high concentrations of IgG isotype will be selected, cloned, and cultures expanded and supernatant will be collected for monoclonal antibody purification. Monoclonal antibodies will be conjugated to paramagnetic beads for IMS. T. gondii oocysts will be visually identified following IMS concentration in water samples by imunofluorescence assay (DFA). The sensitivity of the monoclonal antibodies for IMS and DFA will be determined by spiking experiments with a variety of water types. The specificity of the monoclonal antibodies will be evaluated by testing against closely related organisms. Hypothesis 2: Wastewater samples will be collected from cooperating livestock operations in four regions of the USA. The water samples will be concentrated down to volumes of 100-200 mls using ultrafiltration. Cryptosporidium and Giardia spp will then be further concentrated and quantified from samples using EPA approved Immunomagnetic Separation (IMS) and DFA techniques. Protozoa-positive slides will then be scraped to recover the protozoal DNA and molecular genotyping will be done to characterize human vs animal strains. Standard E. coli FIB testing and bacterial culture will be performed at UCD or at local laboratories to meet holding time requirements. Bacteroidales host-specific assays will also be performed to evaluate the contribution of cow, dog and human fecal markers. Statistical analyses will utilize a variety of software including Stata, R, Minitab, and Mathematica to evaluate and assess trends in the data within individual studies as well as for comparisons across studies in meta-analyses. Additional modeling approaches will be developed specifically for Bacteroidales and QMRA frameworks. The most promising QMRA tools will be further evaluated and compared for their abilities to characterize risk pertaining to specific pathogens as well as contributing host sources. The predicted host-contribution results will be compared with the known presence of the host groups at the various study sites where samples of wastewater and ambient waters were collected.

Progress 03/01/10 to 03/01/13

Outputs
Target Audience: Nothing Reported Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided? Nothing Reported How have the results been disseminated to communities of interest? Nothing Reported What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? No Activity - This project was not funded.

Publications


    Progress 03/01/10 to 03/01/11

    Outputs
    OUTPUTS: Hypothesis 1: Immunizations with Toxoplasma gondii oocyst wall antigens will elicit specific antibody responses in mice that will allow for the development of monoclonal antibodies (mAbs) for immunomagnetic separation (IMS) with direct fluorescent antibody assay (DFA) applications to concentrate and detect T. gondii oocysts in environmental samples. Output: 1. Successfully produced large numbers of oocysts required to perform mass spectrometry and microarray. Produced and harvested greater than 1.4 billion oocysts from the feces of two kittens. The number of oocysts generated is greater than any published. 2. Identified proteins present in the inner vs. outer wall of the oocyst by mass spectrometry. Two separate experiments were carried out to identify oocyst wall proteins with mature sporulated oocysts. Bleach-treated and non-bleach-treated oocyst wall preparations were compared to discern inner vs outer wall proteins (bleach treatment strips the outer layer of the oocyst wall). 3. Identified genes actively transcribed in the oocyst by whole genome Toxoplasma gondii microarray. Several genes were found to be both highly-expressed in oocysts and more abundantly expressed in oocysts than tachyzoites and bradyzoites. Genes with at least a 29-fold increase in signal in oocysts as compared to tachyzoites and bradyzoites are being considered. 4. PCR amplification of target genes for recombinant protein expression is currently being done on 12 target genes having evidence of oocyst wall protein based on using MS and microarray. Primers to amplify each of the genes from DNA and cDNA have been designed and 3 entire genes have been amplified. Plan to produce recombinant proteins using the Bac-to-Bac expression system and those that are successfully produced will be used for mouse immunizations as described in the original proposal. Hypothesis 2: Fecal indicator bacteria levels will not correlate well with pathogen levels in livestock wastewater sources, and QMRA models that incorporate BacteroIdales as an alternative indicator to FIB for fecal pollution will be able to characterize the relative contribution of livestock, humans, and birds to fecal pollution in ambient waters. Output: Synthesized existing information to generate new data about relationships between pathogen indicators, source identifiers, and pathogens which will guide development of quantitative microbial risk assessment (QMRA) models for recreational waters. PARTICIPANTS: Individuals- Patricia Conrad (PI) providing intellectual input, lab space, equipment and other resources. Woutrina Miller (co-PI) providing intellectual input, study design, and link to partner organization for hypothesis 2. Heather Fritz (graduate student)heading up hypothesis 1 study design, lab work, and link to partner organizations. Andrea Packham (SRA) helping with project organization, implementation and lab work. Nadira Chouicha (SRA) working on hypothesis 2 testing and input. David Clark (faculty collaborator) working to help with by providing his expertise for hypothesis 1. Colin Krusor (grad student) working on lab work for hypothesis 1. Florante Dela Cruz (lab assistant) working on lab work for hypothesis 1. Partner organizations- WERF, NIH, WHC, Boothroyd lab at Stanford are all providing additional funding and or input to support this work. Training- this project provides the opportunity for training two graduate students and a lab assistant. TARGET AUDIENCES: Target audience- federal and state agencies charged with water quality and species management; communities in or around recreational water sites; individuals wanting to use recreational water sites; shellfish consumers, marketers and producers. Efforts- scientific and public talks; extension and outreach; updated websites and social networking. PROJECT MODIFICATIONS: Nothing significant to report during this reporting period.

    Impacts
    Hypothesis 1: Our efforts to produce specific antibodies, IMS and DFA methods for improved T. gondii oocyst concentration and detection will have immediate practical applications. Our future aims are to utilize these reagents and methods to begin large-scale testing of California surface waters, bivalves, sewage outfalls, and feces from domestic and wild felids. Federal and state agencies charged with water quality and species management, including range expansion issues, will benefit from pathogen risk-exposure assessment methods and data produced by this project. Hypothesis 2: This project set out to identify and address data gaps pertaining to loadings and concentrations of waterborne pathogens and fecal indicator bacteria in discharges-of-concern to recreational waters and to compile, analyze, and synthesize the data in QMRA models and waterborne risk management frameworks. The risk assessment data and approaches advance the current understanding and establish a new state of the science for recreational water quality and risk assessment tools. This will help stakeholders and agencies involved in implementing and complying with recreational criteria to more accurately predict health risks and mitigate sources of fecal pollution. It is hoped that this research will support QMRA as an important tool for U.S. EPA, providing data for research and tools related to the development and implementation of new/revised recreational water quality criteria.

    Publications

    • No publications reported this period