Progress 01/01/22 to 12/31/22
Outputs Target Audience:The target audience are fish immunology researchers and fish producers. Changes/Problems:During year 1, the graduate student resigned from the graduate program and the Research Associate/Technical support resigned and relocated to another job. What opportunities for training and professional development has the project provided?
Nothing Reported
How have the results been disseminated to communities of interest?The major activities completed include the initiation of the research project. None of the objectives have been completed yet. What do you plan to do during the next reporting period to accomplish the goals?During the next reporting period, we will accomplish Aim 2, Visualizing the immune synapse and cytoskeletal rearrangements.
Impacts What was accomplished under these goals?
The initiation of the research project was completed. Actin & Tubulin Staining Test 2- Removespleen, liver, kidney fromfish. Place each tissue in a C tube with 3 ml of FACS buffer. Run the samples on designated programs. Pour off supernatant-add 4 ml of FACS buffer-add 500 microliters of cells-add 1 microliter of each stain. Incubate for 30 or 60 minutes at 37 degrees Celsius.Centrifuge at 300xg for 10 mins. Pour off supernatant, cells should stay at the bottom of tube. Add 1 ml FACS buffer. Place in well plate. Spleen and kidney tissues were run in the normal program. The liver tissues were dissociated using 36, 36, 36. Alot of background was generated with these steps. Actin & Tubulin Staining Test 3-Removespleen, liver, kidney. Place each tissue intube with 3 ml of FACS buffer. Run the samples. Filter cells into tube-centrifuge for 10 minutes. Pour off supernatant-add 2 ml of FACS buffer-count cells. Dilute cells to 105/ml. Add 500 ul of cells. Add 1 ul of each stain. Incubate for 30 or 60 minutes at 37 degrees C.Centrifuge-pour off supernatant-add 1 ml of FACS buffer. Place in well plate. Run on dissociator using program 9,15,9 for spleen & kidney and program 36,36,36 for liver.We were able to see both colors in catfish and zebrafish cells. Not much background present compared to previous procedure. Octodissociator modifications & associated survival trial 1-Removespleen-cut into 3 sections. Place each section in C tube with 3 ml of FACS buffer. Remove the posterior kidney-cut into 3 sections. Place each section of in a C tube with 3 ml of FACS buffer. Perfuse the liver with 20 ml of PBS. Cut into 3 sections, place in a C tube with 3 ml of RPMI. Run samples. Filter samples with a 70 um MACS SmartStrainer into a 50 ml tube. Count the cells-centrifuge-Pour off supernatant-Add 2 ml of FACS buffer. Layer cells ongradient and centrifuge.Remove buffy layer-put in new tube-add 1 ml of FACS buffer-centrifuge at 500xg for 5 mins. Pour off supernatant-add 1 ml of FACS buffer. Count the cells. Before gradient Octodissociator Trial 1-In liver tissue, normal treatment resulted in 3.35 x 107, with 59% live and 41% dead. The '36, 36, 36' treatment resulted in 1.65 x 107 cells/mL with 24% live and 76% dead. 2x normal treatment resulted in 2.21 x 107 cells/mL with 30% live and 70% dead. In kidney tissue, normal treatment resulted in 3.00 x 107 cells/mL with 50% live and 50% dead, the '9,15,9' treatment resulted in 2.65 x 107 cells/mL with 36% live and 64% dead and 2x normal treatmentresulted in 2.82 x 107 cells/mL with 52% live and 48% dead. In spleen tissue, normal treatment resulted in 1.00 x 107 cells/mL with 18% live and 82% dead. The '9,15,9' treatment resulted in 1.13 x 107 cells/mL with 13% live and 87% dead, and2x normal treatment resulted in 9.31 x 107 cells/mL with 20% live and 80% dead. After gradient Octodissociator Trial 1- In liver tissue, normal treatment resulted in 3.03 x 106, with 13% live and 87% dead. The '36, 36, 36' treatment resulted in 4.39 x 106 cells/mL with 16% live and 84% dead. 2x normal treatment resulted in 2.79 x 106 cells/mL with 12% live and 88% dead. In kidney tissue, normal treatment resulted in 7.54 x 106 cells/mL with 82% live and 18% dead, '9,15,9' treatment resulted in 6.77 x 106 cells/mL with 83% live and 17% dead, and 2x normal treatment resulted in 1.21 x 106 cells/mL with 24% live and 76% dead. In spleen tissue, normal treatment resulted in 5.10 x 106 cells/mL with 23% live and 77% dead. The '9,15,9' treatment resulted in 1.79 x 106 cells/mL with 26% live and 74% dead, and2x normal treatment resulted in 2.28 x 106 cells/mL with 14% live and 86% dead. Octodissociator modifications & associated survival trial 2- Perfusespleen with 5 ml of PBS. Remove fromfish-cut into 3 sections. Placein a C tube with 3 ml of FACS buffer. Remove posterior kidney-cut into 3 sections. Place in a C tube with 3 ml of RPMI. Perfuse the liver with 20 ml of PBS. Remove the liver-cut into 3 sections. Placein a C tube with 3 ml of FACS buffer. Add 60 ul of serum to the normal run time samples. Add 150 ul of seru to the 1.5 run time samples. Runsamples. Filterwith a 40 um strainer into a 50 ml tube. Count cells-centrifuge-pour off supernatant-add 2 ml of FACS buffer. Layercells onto gradient-centrifuge at 800xg for 15 mins. Remove buffy layer-put in new tube. Add 1 ml of FACS buffer. Centrifuge at 300xg for 5 mins. Pour off supernatant. Add 1 ml of FACS buffer. Count cells. Before gradient Octodissociator Trial 2-In liver tissue, normal treatment resulted in 3.35 x 107, with 59% live and 41% dead. The '36, 36, 36' treatment resulted in 3.26 x 107 cells/mL with 57% live and 43% dead. 2x normal treatment resulted in 2.80 x 107 cells/mL with 42% live and 58% dead. In kidney tissue, normal treatment resulted in 1.55 x 107 cells/mL with 20% live and 80% dead, the '9,15,9' treatment resulted in 2.09 x 107 cells/mL with 18% live and 82% dead-2x normal treatment resulted in 2.19 x 107 cells/mL with 30% live and 70% dead. In spleen tissue, normal treatment resulted in 1.05 x 107 cells/mL with 82% live and 18% dead. The '9,15,9' treatment resulted in 1.76 x 107 cells/mL with 31% live and 69% dead, and 2x normal treatment resulted in 7.59 x 106 cells/mL with 78% live and 22% dead. After gradient Octodissociator Trial 2-In liver tissue, normal treatment resulted in 3.06 x 106, with 24% live and 76% dead. The '36, 36, 36' treatment resulted in 3.04 x 106 cells/mL with 24% live and 76% dead. The 2x normal treatment resulted in 2.99 x 106 cells/mL with 24% live and 76% dead. In kidney tissue, normal treatment resulted in 2.55 x 106 cells/mL with 86% live and 14% dead, the '9,15,9' treatment resulted in 6.38 x 106 cells/mL with 88% live and 12% dead, and 2x normal treatment resulted in 7.24 x 106 cells/mL with 89% live and 11% dead. In spleen tissue,normal treatment resulted in 1.23 x 106 cells/mL with 17% live and 83% dead. The '9,15,9' treatment resulted in 1.05 x 106 cells/mL with 36% live and 64% dead, and2x normal treatment resulted in 1.44 x 106 cells/mL with 69% live and 31% dead. Octodissociator & associated survival trial 3-Remove the spleen-cut into 3 sections. Placein a C tube with 3 ml of RPMI. Perfuse the liver with 20 ml of PBS. Remove the liver-cut into 3 sections. Place in tube with 2,940 ml of RPMI. Add 60 ul of serum tosamples. Runsamples. Filter with a 70 um and 30 um smartstrainer into a 50 ml tube. Count the cells-centrifuge at 300xg for 10 mins. Pour off supernatant-add 2 ml of FACS buffer. Layer the cells ongradient and centrifuge. Remove buffy layer-put innew 14ml tube. Add 1 ml of FACS buffer. Centrifuge.Pour off supernatant-cells should stay at the bottom. Add 1 ml of FACS buffer. Count cells. Before gradient Octodissociator Trial 3-In liver tissue, normal treatment resulted in 1.10 x 107, with 27% live and 73% dead. The '36, 36, 36' treatment resulted in 2.87 x 107 cells/mL with 60% live and 40% dead. The 2x normal treatment resulted in 2.53 x 107 cells/mL with 34% live and 66% dead. In spleen tissue, normal treatment resulted in 8.34 x 106 cells/mL with 86% live and 14% dead. The '9,15,9' treatment resulted in 8.75 x 106 cells/mL with 4% live and 96% dead, and 2x normal treatment resulted in 1.17 x 107 cells/mL with 86% live and 14% dead. After gradient Octodissociator Trial 3-In liver tissue, normal treatment resulted in 3.33 x 106, with 18% live and 82% dead. The '36, 36, 36' treatment resulted in 8.43 x 106 cells/mL with 28% live and 72% dead. 2x normal treatment resulted in 3.21 x 106 cells/mL with 22% live and 78% dead. In spleen tissue, normal treatment resulted in 1.16 x 106 cells/mL with 12% live and 83% dead. The '9,15,9' treatment resulted in 5.51 x 105 cells/mL with 36% live and 64% dead, and 2x normal treatment resulted in 1.44 x 106 cells/mL with 24% live and 76% dead.
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